Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0138 ATGGCTGCTTCCAACCTCTCCACTGTCTCCTCCTCCCTTTCCAAACCCTCTTCCCTTCCTCTCAACAAGGCTCACACCCACTCATCTTTCTCTCCTAAAACCCTCACAAACCCGACTTTCTTTCTCAACCCAACTTTTTCTCACAAATCCTATTTCGTACTTTCATCCAAAAACCCGATTTCTGATGTTGTCTCTGTAAATAAATCGTACCCAGAATTTCAATTTGATGATGATGATGACGAAAAGCCTCGTGAGGAGTGTGGTGTGGTGGGTATTTACGGGGACCCAGAAGCTTCTCGTCTTTGCTATTTGGCCCTGCACGCTCTGCAACACCGTGGACAAGAAGGTGCTGGAATTGTCTCTGTGAACAAGAACGTGCTTCAGTCGGTAACTGGTGTTGGGCTTGTTTCCGATGTGTTTAACGAATCCAAGCTCGATCAGTTACCAGGAAGTTTGGCTATAGGGCATGTTCGATACTCCACTGCAGGTCAATCGATGCTCAAGAATGTACAACCCTTCGTTGCAGGGTATCGATTTGGGTCTGTTGGGGTTGCTCACAATGGAAATCTGGTGAATTATCGAACGTTAAGAGCGAAGCTTGAAGATAGTGGGTCGATTTTTAATACTAGTTCTGATACTGAGGTTGTGCTTCATCTTATTGCTACTTCAAAGCATAGACCCTTTATATCGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCTATTGTTTTTGTAACAGAGGATAAGCTTGTTGCTGTGAGGGATCCATTTGGGTTTCGACCTTTGGTTATGGGAAGGAGAAGTAATGGTGCTATTGTTTTTGCCTCTGAAACTTGTGCTCTTGATTTGATTGAAGCAACATACGAAAGGGAGGTTTACCCAGGAGAAGTATTGGTGGTGGACAAAAATGGGCTTCAATCTCTTTGCTTAATGTCTCATCCACAGCCAAAACAATGCATTTTTGAGCATATTTACTTTGCACTTCCCAACTCAGTGGTTTTTGGAAGATCAGTGTATGAATCTCGGAGAAAATTTGGGGAAATTCTAGCTACTGAAAGCCCAGTGGATTGTGATGTTGTGATTGCAGTTCCAGATTCTGGTGTGGTAGCTGCACTTGGTTATGCTGAAAAAGCTGGGGTTCCTTTTCAACAAGGGCTAATCAGATCTCACTATGTCGGAAGAACTTTCATTGAGCCATCACAGAAGATTAGAGACTTTGGAGTGAAACTGAAGCTCTCACCAGTTAGAGCTGTGCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGATTCTATTGTGAGAGGAACTACATCTTCCAAAATTGTGAGGTTGATTAAAGAAGCAGGTGCTAAGGAAGTTCACATGAGGATTGCAAGCCCACCCATTATTGCTTCATGCTATTATGGGGTGGACACACCAAGTTCAGAGGAGTTGATATCCAATAGGATGAGTGTGGAGGAAATTAGGGAGTTCATTGGGTCAGATTCACTTGCTTTTCTCCCATTTGATAGCCTGAAGAAGCTTTTGGGAAATGATTCTTCTAATTTTTGTTATGCTTGCTTCTCTGGGAAGTATCCTGTTGAGCCTAGAGAACTCAAAGTGAAGAGAATTGGTGATTTTGTGGATGATGGACTAAATGGGAGTTTGGAATCCATTGATGGTGGTTGGATTCAAGCAAACCTGAATCAGAAAGGGATCAAGGTACCCAGTCTCTGA 1722 0.4321 MAASNLSTVSSSLSKPSSLPLNKAHTHSSFSPKTLTNPTFFLNPTFSHKSYFVLSSKNPISDVVSVNKSYPEFQFDDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVSVNKNVLQSVTGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDSGSIFNTSSDTEVVLHLIATSKHRPFISRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVYPGEVLVVDKNGLQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAEKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGNDSSNFCYACFSGKYPVEPRELKVKRIGDFVDDGLNGSLESIDGGWIQANLNQKGIKVPSL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0138 573 CDD PRTases_typeI 349 460 IPR000836 -
Dere06g0138 573 Pfam Glutamine amidotransferase domain 165 284 IPR017932 -
Dere06g0138 573 SUPERFAMILY PRTase-like 322 533 IPR029057 -
Dere06g0138 573 Gene3D - 346 510 IPR029057 -
Dere06g0138 573 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 87 528 IPR029055 -
Dere06g0138 573 MobiDBLite consensus disorder prediction 1 31 - -
Dere06g0138 573 Pfam Phosphoribosyl transferase domain 346 456 IPR000836 -
Dere06g0138 573 NCBIfam amidophosphoribosyltransferase 87 528 IPR005854 GO:0004044|GO:0009113
Dere06g0138 573 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 87 306 IPR017932 -
Dere06g0138 573 CDD GPATase_N 87 337 IPR035584 -
Dere06g0138 573 Hamap Amidophosphoribosyltransferase [purF]. 86 527 IPR005854 GO:0004044|GO:0009113
Dere06g0138 573 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 87 310 IPR029055 -
Dere06g0138 573 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 85 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0138 Dere-ChrDere06 1857733 1859454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0138 67 560 PRT Gene Family AT2G16570 84.507 0.0 865