Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0109 ATGGGTGCTCAATGTTCCAAGCAAATTCAGAGAAGAAAGGATATTCGGACCGAGAAGAAAGTTCTGGCTGATCTTAAGGGTTCCGGCGAAGACTACCCAGGGTCAGATTATCATCCACAGGATAGGAAAAACTGGATGTCTGAGCTTAACCCAGAGAAAGTTCATATCAACAAGATCGTTTGGCCAGGAACGCACGATTCTGCAACGAACAGAATCGGCTTCCCCTTCATCTCTCGTCCGTTCGCTCAATGCCAATCCTTATCGATCTACCACCAGCTCGTGCTGGGGACCCGGGTCATCGACATTCGGGTCAATGAGACCCAACGGGTCTGCCACGGAATCCTCTCCACCTACGGCGTCGACGTCGTGATCAACGACGTCAAGAAGTTCCTATCGGAAACCGAATCGGAGATCATCATCCTCGAGATCCGTACGGAGTTCGGGCACGACGACCCGCCCGAGTTCGACAAGTACTTGGTGGATCAACTGGGCGAGTTTCTGATCCACCAGGACGATCACGTGTTTGGGAAGACGATAGCGGAAGTGTTGCCCAAGAGGATCATATGTGTTTGGAAGCCGAGAAAATCAACTCAACCCGGACCGGGGGGTCCGCTTTGGAGCGGAGGGTATTTAAAGGATAATTGGATCGACACGGATTTGCCGTCGACGAAATTCGAGAGCAACATGAAGCATCTGAGCGAGCAGCCGCCGGCGGCGTCGAGGAAGTACTTCTATAGGGTGGAGAACACGGTGACGCCGGTGGCGGATAACCCGGTTCTGTGTGTTCGACCCGTAACCAGAAGGATCCATGGGTGCAATAGGCTCTTCATTTCACAGTGTTTTTCTAAAGGATGTGCCGATAGACTACAGGTATTCTCTACAGATTTTATAGATGAAGATTTCGTGGATGCTTGTGTTGGCCTCACTCATGCAAGGGTTGAAGGGAAAGCCTGA 954 0.5136 MGAQCSKQIQRRKDIRTEKKVLADLKGSGEDYPGSDYHPQDRKNWMSELNPEKVHINKIVWPGTHDSATNRIGFPFISRPFAQCQSLSIYHQLVLGTRVIDIRVNETQRVCHGILSTYGVDVVINDVKKFLSETESEIIILEIRTEFGHDDPPEFDKYLVDQLGEFLIHQDDHVFGKTIAEVLPKRIICVWKPRKSTQPGPGGPLWSGGYLKDNWIDTDLPSTKFESNMKHLSEQPPAASRKYFYRVENTVTPVADNPVLCVRPVTRRIHGCNRLFISQCFSKGCADRLQVFSTDFIDEDFVDACVGLTHARVEGKA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0109 317 SMART plcx_3 50 192 IPR000909 -
Dere06g0109 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 81 173 IPR000909 -
Dere06g0109 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Dere06g0109 317 CDD PI-PLCXDc_plant 32 312 - -
Dere06g0109 317 PANTHER UNCHARACTERIZED 32 310 - -
Dere06g0109 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
Dere06g0109 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0109 Dere-ChrDere06 1234871 1235824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0109 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 74.843 0.0 510