Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0107 ATGTTTCCTTCTTCTTCTTTATCTTCTTGTTCTTCCATTACCTTCCTCCAACCCTCCTCCAGAGTTCAAAGACCTCATTTTCCCAGGAAAATCGCTGCCTCTTGTGCTGCAACAAAAAACAGAGGAAACAGAGCATCGGCAAGCATGGCCTTTTCTTCCTCTGCTTCTCTCTACGAGGTTCTTGGGATTTCAATGGGTGCTTCCTGCAACGAGATAAAGGCTGCTTACAGGAAGCTCGCAAGAACTTACCATCCTGATGTTGTGGCCATGAATCAGAAGGAATCCTCGGCCAGCGAGTTCATGAAGATCCATTCGGCTTATTCCACGTTGTCGGATCCCAACAAGCGAGCTCAATATGACAGACAGATTTATGGGTACAATCGAAGGCCTCTTACTGCTTCAGATATAGCTTCTATGTCTGGGTATCCTCACAGATATGCTCAATCTGGAATGAGATGGGAGACTGATCAGTGTTGGTAG 480 0.4604 MFPSSSLSSCSSITFLQPSSRVQRPHFPRKIAASCAATKNRGNRASASMAFSSSASLYEVLGISMGASCNEIKAAYRKLARTYHPDVVAMNQKESSASEFMKIHSAYSTLSDPNKRAQYDRQIYGYNRRPLTASDIASMSGYPHRYAQSGMRWETDQCW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0107 159 Gene3D DnaJ domain 43 138 IPR036869 -
Dere06g0107 159 ProSiteProfiles dnaJ domain profile. 56 123 IPR001623 -
Dere06g0107 159 SUPERFAMILY Chaperone J-domain 52 126 IPR036869 -
Dere06g0107 159 CDD DnaJ 58 112 IPR001623 -
Dere06g0107 159 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 18 135 - -
Dere06g0107 159 SMART dnaj_3 55 115 IPR001623 -
Dere06g0107 159 PRINTS DnaJ domain signature 58 76 IPR001623 -
Dere06g0107 159 PRINTS DnaJ domain signature 95 115 IPR001623 -
Dere06g0107 159 PRINTS DnaJ domain signature 76 91 IPR001623 -
Dere06g0107 159 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Dere06g0107 159 Pfam DnaJ domain 57 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0107 Dere-ChrDere06 1216476 1216955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0107 47 120 C2H2 Transcription Factor Family AT1G74250 42.308 3.98e-10 55.5