Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0091 ATGGGAAGGTCCCCTTGCTGTGAAAAAGCTCACACCAACAAAGGTGCTTGGACCAAGGAAGAAGACGATCGCCTCATAGCTTATATTCGAGCTCACGGCGAGGGCTGTTGGCGCTCTCTCCCCAAAGCCGCCGGCCTTCTCCGCTGTGGCAAGAGCTGCCGTCTCCGGTGGATAAACTACCTCCGTCCCGACCTTAAACGAGGCAATTTCACCGAGGAAGAAGATGAACTCATCATCAAGCTCCATAGTCTTCTGGGAAACAAGTGGTCTCTAATAGCTGGGAGATTACCCGGAAGAACAGATAATGAGATAAAGAATTACTGGAACACTCATATCAGAAGGAAGCTTTTGAACAGGGGAATCGACCCTTCCACTCACAGGCCTCTCAATGAGTCTGCAAATTCTGCTCAGAATAATCAAGAATCCACCACAATCTCTTTTGCGTCGCATGCGATACAAGAAGAGAGTAACAACAACAGCGCGAGCGTATTTGGGGAGATTCACAAAGATGCGAAAAGAGGCATGGTAGAACGATGCCCTGACTTGAACCTCGAGCTAACGATTAGTCCTCCTCATCAAAACCAAGAGCCTGAGGATCAACCATTGTTGAAGAGTAGTGCAGGAACAAGAAGCCTGTGCTTCGCTTGCAGTTTGGGCTTGCAGAATAGTAAGGATTGCAGCTGTGGAATTGTTGGTACCATTAATGGCAGCACTAGCGGGAGTAGTGGCACAAGTGGGTATGATTTCTTGGGGTTGAAAAGTGCTATTTTGGATTACAGAAGCTTGGAGATGAAATGA 798 0.4787 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNESANSAQNNQESTTISFASHAIQEESNNNSASVFGEIHKDAKRGMVERCPDLNLELTISPPHQNQEPEDQPLLKSSAGTRSLCFACSLGLQNSKDCSCGIVGTINGSTSGSSGTSGYDFLGLKSAILDYRSLEMK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0091 265 FunFam MYB-related transcription factor 13 66 - -
Dere06g0091 265 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Dere06g0091 265 CDD SANT 69 112 IPR001005 -
Dere06g0091 265 SMART sant 66 114 IPR001005 -
Dere06g0091 265 SMART sant 13 63 IPR001005 -
Dere06g0091 265 MobiDBLite consensus disorder prediction 120 140 - -
Dere06g0091 265 CDD SANT 16 61 IPR001005 -
Dere06g0091 265 Gene3D - 14 66 - -
Dere06g0091 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dere06g0091 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere06g0091 265 Gene3D - 68 146 - -
Dere06g0091 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere06g0091 265 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 175 - -
Dere06g0091 265 FunFam Myb transcription factor 68 137 - -
Dere06g0091 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere06g0091 265 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Dere06g0091 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dere06g0091 265 MobiDBLite consensus disorder prediction 125 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0091 Dere-ChrDere06 1043166 1044090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0091 1 265 MYB Transcription Factor Family AT4G38620 60.764 2.84e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere06g0091 Myb_DNA-binding 3.7e-14 CL0123