Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0080 ATGGATGACGGTGAGCTTGATTTCATAAACCGAGAAGTGTTTTCCAGTTCAGACATGGGAGAACTTCCGAGCAGTTGCTCAATGGACAGTTTCATTGAAGATCTTTTGAAGGACACGCATGCTTGCACTCACACCCACACTTGCAACCCTCCTGGCCCCGATTATTCACATACCCACACCTGTTATCATATGCACACCAAAATTGTGCCAGCACCTTCTGAAGACAAGGTTGGGTCTGATGATAGTGCAGAGTCTGTTGAAAAGAAGTCCAAAAAATGTCTTCTTGGTAACCGTGCAGCAGTTCGTAAATACCGTGAGAAGAAGAAAGCCCAAACTGCATCCTTGGAGGATGAAGTTGTAAAGTTGAAAGCTTTGAATCAACATTTGTTGAAGAGGTTGCAAGGTCAATCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTAGTGGACATTCGCGGAAGGATTAATGGGGAGATTGGATCATTTCCATACCAGAAATCAGCTAACTCAAACGTGTCAACCCCACACTTGCCTAGTTCCTATTTGATGAATCCTTGTGAAGTACAGTGTGGTGATCAGGTCTATTGTCTTCACCAAGGAGCAGACTGCGAGAACACAGAACGCGTATCAATTAACGGGCAAGGATTGAATGGTTGTGAATTTGAAGGTATCCAGTGCCCAACAAGCCAGAATTTGGGGCTCAATTATCTTTCTGATTGTGGAGTTGGAAAGATGCTTCTTGGTTATCTCTGTCTTTTATCTTGGATAATATATTGGTGGTCTCTGACTCTCAGTGTCATGTTTGGATATTGTGCTGAAGTTCAATTGCTAGATTTCCTATTTGATAAAGTAGTTGTTAATATGAAGCCTGCAAAGCTTATGGCAGATAGACTTGGTGCTTTTCTATGTACTATCAAGTTTATTCCAGTATTAGCATTTGTTGTGTGA 954 0.4203 MDDGELDFINREVFSSSDMGELPSSCSMDSFIEDLLKDTHACTHTHTCNPPGPDYSHTHTCYHMHTKIVPAPSEDKVGSDDSAESVEKKSKKCLLGNRAAVRKYREKKKAQTASLEDEVVKLKALNQHLLKRLQGQSALEAEIARLKCLLVDIRGRINGEIGSFPYQKSANSNVSTPHLPSSYLMNPCEVQCGDQVYCLHQGADCENTERVSINGQGLNGCEFEGIQCPTSQNLGLNYLSDCGVGKMLLGYLCLLSWIIYWWSLTLSVMFGYCAEVQLLDFLFDKVVVNMKPAKLMADRLGAFLCTIKFIPVLAFVV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0080 317 CDD bZIP 97 144 - -
Dere06g0080 317 Coils Coil 105 125 - -
Dere06g0080 317 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Dere06g0080 317 Gene3D - 75 153 - -
Dere06g0080 317 SMART brlzneu 84 152 IPR004827 GO:0003700|GO:0006355
Dere06g0080 317 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Dere06g0080 317 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0080 Dere-ChrDere06 913463 915337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0080 1 228 bZIP Transcription Factor Family AT4G35040 64.502 2.07e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere06g0080 bZIP_2 2.4e-10 CL0018