Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0077 ATGTCGATTCAAGCGCAGTTTTATTCGAACAATCTCGGGTTTCCATTGTGTGGGTCGCAGGATTTGATGATTGAGAATGGTCATGGAACTGTTGGGCTAGCTCAGTCATGTTTCAATTTGCAACAGAAACATCATCAGCTACAGCAACAACAAGAACAGAGTTTCCGACAGTCGTACAATGAGAGGCAGAGGAATCCAAACATGTTCGTCGACACAAATCTTCTCTTCGGTTCTACTTCGAAAGCCAACAACCTTATTCCATCTTCAATGCCTATTCCCCAAACCTTAGCTCTTCAATTCGAGAAGCAGAGCCAGGACATTGATCGCTACATCAGATTACAGAATGAGAAATTGAGAGTTATGCTTCAAGAGCAGAGGAAGCAACAAGTGGCGACAATGATTAAGAAGGTTGAAACTGATGCGATTTATTTGTTGAGGCAAAAGGATGAAGAAATTGCACAAGCAGCGAAGAAAAGAATGGAGTTGGAAGAGTTTCTGAGAAGGCTAGAGGAAGAGAATCAAGCATGGCGTAGACTGGCTCAAGAAAGAGAAGCTGTGGTATTATCACTGCATAACACGTTGGAGCAGATGAAAGAAAGAGCTTGTTATGGTTTCAACAATGGTGTTGCTGCAACAGATGATGCGGGGTCCTGCTGTAACGAAGAAAGTGAAAAGAAAAACATTCAAGAAGAGGAGAGAGAAGAAAGAAGAATTGGTATTGGTGGGGCAGAAGATGTTGAAGTTGAACAAAGTACGAGAAAGATGATGGTATGCAAAAGCTGTGATTCTGGGAAGGCGTGCTTTCTGTTGCTTCCTTGCAGGCACCTTTGCTCATGCAAAGCTTGCGAGGCTTTGCTTCAGGCTTGCCCTGTTTGCAGTATGCCTAAGAAAGCTAGTATAGAGACTTTGATTTTCTAG 918 0.4292 MSIQAQFYSNNLGFPLCGSQDLMIENGHGTVGLAQSCFNLQQKHHQLQQQQEQSFRQSYNERQRNPNMFVDTNLLFGSTSKANNLIPSSMPIPQTLALQFEKQSQDIDRYIRLQNEKLRVMLQEQRKQQVATMIKKVETDAIYLLRQKDEEIAQAAKKRMELEEFLRRLEEENQAWRRLAQEREAVVLSLHNTLEQMKERACYGFNNGVAATDDAGSCCNEESEKKNIQEEEREERRIGIGGAEDVEVEQSTRKMMVCKSCDSGKACFLLLPCRHLCSCKACEALLQACPVCSMPKKASIETLIF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0077 305 FunFam Baculoviral IAP repeat containing 7 267 303 - -
Dere06g0077 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 303 IPR013083 -
Dere06g0077 305 Coils Coil 145 186 - -
Dere06g0077 305 PIRSF SBP1_RNase_bind 11 305 IPR017066 -
Dere06g0077 305 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 50 301 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0077 Dere-ChrDere06 864906 865920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0077 257 292 Miscellaneous Gene Families AT2G21380 44.444 2.78e-06 47.0