Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0073 ATGGCTAATATGGTTTCCAGGCTGACAAACTACTATTACACTCTCAAGCATAGCCGAGGCCAACTTGGGAGGTTTCATATCATCGCTTTCGTTTCGTTTCAGAAACACATTGAGGTTTTTTTCAAGCAGAGAGAGATGTCGAAGGAGGTGAGTGAAGAAGGAAGAACCCACCATGGGAAAGACTACGTGGACCCGCCACCGGCTCCGCTCCTTGACATGGCTGAGCTTAAGCTCTGGTCCTTCTACAGAGCCCTCATCGCCGAGTTCATCGCCACCCTTCTCTTCCTCTACATCACCGTCGCCACCGTCATCGGTCACAAAAAGCAGACTGGCCCATGCGACGGCGTGGGCCTCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTTGTCTACTGCACCGCCGGTATCTCTGGTGGACACATAAACCCTGCGGTGACGTTTGGGTTGTTCTTGGCACGGAAGGTGTCACTGATACGAGCTATAGCGTACATGGTGGCTCAGTGCTTGGGAGCTATCTGTGGTGCTGGGTTGGTGAAGGCGTTCATGAAGCACTCGTACAACTCGCTGGGTGGCGGGGCTAACTCAGTGTCTTCTGGCTACAGCAAAGGCACTGCTCTGGGTGCCGAGATTATTGGCACCTTCGTACTTGTGTACACAGTTTTCTCAGCCACCGATCCCAAGAGAAGCGCCCGGGACTCCCATGTCCCTGTTCTGGCTCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACTATCCCAATCACTGGTACAGGTATAAACCCTGCAAGGAGCTTCGGTGCTGCTGTTATCTTCAACAATGGCAAAGTCTGGGACGACCACTGGATCTTCTGGGTTGGTCCATTTGTGGGAGCACTGGCTGCGGCGGCTTACCATCAGTACATTCTGCGAGCAGCAGCTATCAAGGCATTAGGATCCTTCCGAAGCAACCCCACCAACTAA 978 0.5327 MANMVSRLTNYYYTLKHSRGQLGRFHIIAFVSFQKHIEVFFKQREMSKEVSEEGRTHHGKDYVDPPPAPLLDMAELKLWSFYRALIAEFIATLLFLYITVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIAYMVAQCLGAICGAGLVKAFMKHSYNSLGGGANSVSSGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNGKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0073 325 CDD MIP 83 307 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 83 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 287 307 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 247 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 211 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 162 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 PRINTS Major intrinsic protein family signature 125 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 Gene3D Glycerol uptake facilitator protein. 68 325 IPR023271 -
Dere06g0073 325 Pfam Major intrinsic protein 76 303 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 FunFam Probable aquaporin PIP1-2 68 323 - -
Dere06g0073 325 ProSitePatterns MIP family signature. 143 151 IPR022357 -
Dere06g0073 325 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 52 314 IPR034294 -
Dere06g0073 325 NCBIfam MIP family channel protein 87 303 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0073 325 SUPERFAMILY Aquaporin-like 74 309 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0073 Dere-ChrDere06 831592 833152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0073 46 325 Major Intrinsic Protein MIP AT4G35100 91.429 0.0 533