Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0062 ATGGTTAATATTAGAAAAGTTCTTCGATTTGATGAAGTTTTACAATCCATTAGATCTCTGTTTATCCCTACTACTTCCCTTCATCTCTCTTCTGCTTCAGATCAGAGGATAAGTAAAGAAAAGAGTTCAAACATGGGTCTGGCTCAAAACAATCTTGATTTGGAGGAGGGAACCTTGGAGATAGGAATGGAATACAGAACTGTATCTGGAGTTGCTGGACCGTTGGTCATTCTTGATAAAGTTAAGGGACCCAAATATCAAGAGATTGTTAACATTCGTTTAGGAGATGGATCTACTCGACGAGGGCAAGTTCTAGAAGTTGATGGTGAAAAGGCTGTTGTTCAGGTCTTTGAAGGTACATCTGGGATTGACAATAAATTTACAACTGTGCAGTTTACTGGAGAGGTGTTGAAGACTCCTGTCTCACTGGACATGCTTGGGCGGATATTTAATGGTTCTGGAAAACCTATTGATAATGGTCCACCCATATTGCCTGAGGCTTACTTGGATATATCAGGAAGTTCTATCAACCCTAGTGAGAGAACCTACCCAGAGGAGATGATACAGACAGGAATATCTACAATTGATGTCATGAACTCCATTGCTAGAGGTCAAAAGATACCTCTTTTCTCAGCTGCTGGTCTTCCCCATAATGAAATTGCTGCTCAGATCTGTCGTCAGGCTGGCTTAGTCAAGCGCTTGGAGAGGTCTGATAATCTTCTTGAGGGTGGGGAAGAGGACAATTTTGCCATTGTGTTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTTAAACGTGACTTTGAGGAGAATGGCTCAATGGAGAGAGTGACTCTTTTTCTTAATCTGGCAAACGATCCTACAATTGAGCGTATTATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCATATGAATGTGGGAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCGGGAAGGCGTGGATATCCTGGGTACATGTATACAGATCTTGCAACAATCTATGAACGTGCTGGAAGAATTGAAGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTAACCATGCCAAATGATGATATTACACATCCAACTCCTGATCTTACTGGATATATTACCGAGGGGCAGATATACATAGATAGGCAGCTGTATAACAGACAGATATACCCACCAATCAATGTCCTTCCATCGCTTTCTCGGTTGATGAAGAGTGCCATTGGTGAGGGCATGACTCGAAGGGATCATTCTGATGTTTCCAACCAGCTCTATGCGAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCCGTTGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGTTGTATCTGGAATTTTTGGACAAGTTCGAGAGGAAGTTTGTTACTCAAGGAGCTTATGACACCCGCAATATCTTCCAGTCACTAGATCTTGCATGGACTTTACTTCGGATTTTCCCTCGCGAGCTTCTTCATCGTATACCAGCAAAGACTCTTGACCAGTATTATAGCCGAGATGCCAGTAATTGA 1599 0.424 MVNIRKVLRFDEVLQSIRSLFIPTTSLHLSSASDQRISKEKSSNMGLAQNNLDLEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLERSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDASN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0062 532 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 191 421 IPR000194 GO:0005524
Dere06g0062 532 Gene3D - 73 532 - -
Dere06g0062 532 FunFam V-type proton ATPase subunit B, brain 73 532 - -
Dere06g0062 532 Pfam ATP synthase alpha/beta family, beta-barrel domain 68 134 IPR004100 GO:0046034|GO:1902600
Dere06g0062 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 427 IPR027417 -
Dere06g0062 532 CDD ATP-synt_V_A-type_beta_N 64 135 - -
Dere06g0062 532 CDD V_A-ATPase_B 136 429 - -
Dere06g0062 532 NCBIfam V-type ATPase subunit B 64 530 IPR005723 GO:0033180|GO:0046961|GO:1902600
Dere06g0062 532 PIRSF V-ATPsynth_beta/V-ATPase_B 56 532 IPR022879 -
Dere06g0062 532 Hamap V-type ATP synthase beta chain [atpB]. 62 530 IPR022879 -
Dere06g0062 532 CDD ATP-synt_V_A-type_beta_C 431 525 - -
Dere06g0062 532 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 49 530 IPR022879 -
Dere06g0062 532 ProSitePatterns ATP synthase alpha and beta subunits signature. 412 421 IPR020003 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0062 Dere-ChrDere06 710870 718377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0062 43 532 Primary Pumps ATPases(2) AT4G38510 96.327 0.0 972