Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0042 ATGATCAGCGTCAAGACGCTAATTCAGATGGCAAGGAAGTGGCAGAAAATGGCTGCTGGTAGACGTATGAAGAGAATCTCGTATGCAATTAGAAGTGACTTGGATCAGAGGAAAGGATTAGCAGCAAATAAGGGGCACTTCGTAGTTTATAGTATGGATCAGAAGCGATTTGTGGTTCCAATAGAGTATCTAAGCAAGAAGGTGTTTAAGGAACTGCTGAAGTGGTCGGAGGAAGAGTATGGATTACCAAGCAATGGACCAATTATGCTGCCAGTTGATGGCGTCGTGTTGGAGTATGTAATAGCCTTAGTTGGAGAACATGTCCCTGAAGATGTAGAGAAGGCTTTGATCTCTTCCATGCCCACATGTCACGCCCCGCCACGCTCTTCTCATCTTGGCCTAACACAAGCCCACCAACAAAATATTATCTATGGCTTTTGA 441 0.4467 MISVKTLIQMARKWQKMAAGRRMKRISYAIRSDLDQRKGLAANKGHFVVYSMDQKRFVVPIEYLSKKVFKELLKWSEEEYGLPSNGPIMLPVDGVVLEYVIALVGEHVPEDVEKALISSMPTCHAPPRSSHLGLTQAHQQNIIYGF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0042 146 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
Dere06g0042 146 Pfam Auxin responsive protein 12 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0042 Dere-ChrDere06 496301 496741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0042 3 104 Calmodulin-binding Proteins AT4G34750 32.039 9.68e-10 52.0