Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0038 ATGGGAGGCAGCGACGAAATCGAACTTCCAGGCTTTCGATTCCACCCAACGGAAGAAGAACTGCTTGATTTTTATCTTAAGAATATGATTACAGGCAAGAAACTGCGTTTCGACATCATCGATTTGCTCAACATCTATCACCACGATCCCTGGGATTTACCTGGTATGGCGAAGGTGGGGGAAAGAGAATGGTACTTCTTCGTGCCGAGAGACCAAAAACACGGTAACGGAGGGAGGCCAAACCGGACCACCCAGAAAGGATTCTGGAAAGCCACCGGTTCGGACCGCAAAGTCGTAAGCTTGTCGGACCCAAAGCGGGTGATTGGGCTGAGGAAGACTTTGGTTTTCTACGAGGGAAGAGCTCCCCGAGGATGCAAGACCGATTGGGTTATGAATGAGTACCGCTTGCCCGACACTTTCCGCTTCCCTAACAAGGACATGATAGTGCTGTGCAAGATATACAGAAAGGCAACATCGTTGAAGGTGCTGGAGCAAAGGGCAGCACAGTGTGGGTCTTCTTGCCCTTCGTCTCCTCCTTCCTCAAACGACACCGTCTCCTTCACGGCCCAACCGGAGATGCCATTGCAACTCAAGACAGAGGTGGAAGAAACGGTGCAACCACCGTACCAAAATATTACTAACCATTTGCCTATCGTAGACCTTAAACCAAACACTAGTTGTGGTAAATCACTTCAATTGCCCACGCCAAAGCACCAACTGCCCGAGCTTCAACTGCCCATTAACATGAACATGATAGGCATGGACTGGACCCATGATCTCTTCTCCCCTCAATTAAACAGTCCATGGTTTCAGTGTTTGACTCCTTACTCCAACATCTTAAATTTCTAA 849 0.4876 MGGSDEIELPGFRFHPTEEELLDFYLKNMITGKKLRFDIIDLLNIYHHDPWDLPGMAKVGEREWYFFVPRDQKHGNGGRPNRTTQKGFWKATGSDRKVVSLSDPKRVIGLRKTLVFYEGRAPRGCKTDWVMNEYRLPDTFRFPNKDMIVLCKIYRKATSLKVLEQRAAQCGSSCPSSPPSSNDTVSFTAQPEMPLQLKTEVEETVQPPYQNITNHLPIVDLKPNTSCGKSLQLPTPKHQLPELQLPINMNMIGMDWTHDLFSPQLNSPWFQCLTPYSNILNF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0038 282 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 199 - -
Dere06g0038 282 FunFam NAC domain-containing protein 67-like 17 160 - -
Dere06g0038 282 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Dere06g0038 282 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Dere06g0038 282 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Dere06g0038 282 SUPERFAMILY NAC domain 9 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0038 Dere-ChrDere06 471242 472301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0038 6 279 NAC Transcription Factor Family AT2G17040 57.394 5.07e-106 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere06g0038 NAM 2.2e-35 No_clan