Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0021 ATGGAGGCTGCTCATAAGCCTTGTGTGGTCAGCAGAAGAGATTTATCCGGGAGATGTACAGCACAGAGGATTCCGCACTGCCCTGAAGAATCTAAAATACCTGGCTTCTTGGCTCCTAACCCCAGTTACCAGTTGGATTGTGCAATAATAGATGTTGAAGAATACGAGGACGTTGGTGACAATGGAGTTCCAGTGTTTGTGAAGCACACAGAAGCAATGCTAGATGAAATTGACAGACTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATCGACTCTTGTGATGCTATGGATCCACTTGCAGTCGTTGAGTACATAGATGAGATCTACGAATTTTACAAAAAAACTGAGAATTCCAGCTGCATCTCTCCTGATTATATGACTGGTCAGTTTGACATCAATGATAAGATGAGGGGTATCCTCATTGATTGGCTTATTGAGGTTCACTACAAATTTGAACTTATGGAGGAGACATTGTTCCTTACTGTCAGTCTTATAGACAGGTTCTTGGAGCGACAGGTGGTTATCAGAAAGAAGCTTCAGTTGGTTGGTGTAACAGCCATGCTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCCACTGTTGAGGATTTTATCTTGATAACAGATAAGGCATACAAAAGGGAAGAAGTTCTGAATATGGAGAAATTAATGATGAACACTTTACAATTCAACTTGTCTGTGCCTACACCGTACGTGTTCATGAGGAGATTCCTTAAGGCAGCTCAAGCTGACAAAAAACTGGAGCTCTTGTCCTTCTTCATAATCGAGCTTTGCCTGGTAGAATACAAAATGCTCAACTTTTCACCATCCTTGCTAGCTGCTGCAGCTATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAGTGGACAAAGACAAGCGAGTGGTACACCAATTACTCGGAACACCAGCTTCTAGAGTGCTCAAGAATGATGGTCACCTTCCATCTAAAGGCTGGAACAGGAAAACTTACCGGTGCCTATAGGAAGTACAGTACGTGGAAGTATGGTTATGCCGCAAAATTTGAACCAGCCCCGTTTCTACTGGACAGCGATTAA 1095 0.4311 MEAAHKPCVVSRRDLSGRCTAQRIPHCPEESKIPGFLAPNPSYQLDCAIIDVEEYEDVGDNGVPVFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDSCDAMDPLAVVEYIDEIYEFYKKTENSSCISPDYMTGQFDINDKMRGILIDWLIEVHYKFELMEETLFLTVSLIDRFLERQVVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLNMEKLMMNTLQFNLSVPTPYVFMRRFLKAAQADKKLELLSFFIIELCLVEYKMLNFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEHQLLECSRMMVTFHLKAGTGKLTGAYRKYSTWKYGYAAKFEPAPFLLDSD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0021 364 ProSitePatterns Cyclins signature. 142 173 IPR006671 -
Dere06g0021 364 Gene3D - 126 238 - -
Dere06g0021 364 Gene3D - 112 352 - -
Dere06g0021 364 SUPERFAMILY Cyclin-like 239 357 IPR036915 -
Dere06g0021 364 CDD CYCLIN_AtCycB-like_rpt2 240 356 - -
Dere06g0021 364 CDD CYCLIN_AtCycB-like_rpt1 93 235 - -
Dere06g0021 364 Pfam Cyclin, C-terminal domain 240 356 IPR004367 -
Dere06g0021 364 PANTHER CYCLINS 84 344 IPR039361 -
Dere06g0021 364 PIRSF Cyclin_A_B_D_E 50 364 IPR046965 GO:0016538|GO:0044772
Dere06g0021 364 SMART cyclin_7 147 231 IPR013763 -
Dere06g0021 364 SMART cyclin_7 244 326 IPR013763 -
Dere06g0021 364 SMART Cyclin_C_2 240 357 IPR004367 -
Dere06g0021 364 FunFam G2/mitotic-specific cyclin-1 224 352 - -
Dere06g0021 364 Pfam Cyclin, N-terminal domain 112 238 IPR006671 -
Dere06g0021 364 SUPERFAMILY Cyclin-like 102 237 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0021 Dere-ChrDere06 319775 321990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0021 5 361 Core Cell Cycle Gene Families AT1G20610 61.749 1.24e-158 450