Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere06g0018 | ATGTCTAACTTCAACTCCAACTCCGATTCTCCTGCTGCTACAAGTCCAAGCAGCGCCCAGAAACACCATTCTCGAAACGCACGAAAGAGACGCACCAGTACCACCACCAAATTGATCACCATCATCGACCATAACATCGCTTTCAAGCCCAAGTATCCTGATGCGCCTGCCATTACTCGCCCATGCACCGAGTGTGGAAAGAAGTTCTGGTCATGGAAGGCTCTGTTTGGGCACATGCGCTGCCACCCTGAACGTCAATGGCGTGGCATCAACCCACCCCCCAACCTCCAACGACAACCTCCTCCGGAGATCATGACCCAAGAAGACCACGAAATCGCCGCTGGTCTGCTGTTGCTTGCCAAAGGAGACAACGCAACCCGCACCCCCTGCGGTTCCGGCCATCAGGAATATTCCGAAGGAGAGTGGGCGGGTTCGTCGGGTTTGAGTGGGCGGTTCGAGTGCCCTAGTTGCAACAAGGTGTTTGGGTCACACCAGGCTTTGGGAGGGCATGGGGCCAGCCACAAGAATTTGAAGGGGTGTTTTGCCAGTGATATAACAAATGATGGAGAAGATGACGAGAGTGAAGAGATGGAGATGGTTTTGGAAGGGCACAAGTGCAGCATATGTCTGAGGGTGTTTTCGAGCGGGCAAGCACTGGGTGGCCACATGAGGTGTCACTGGGACAAAGGAGAACCTGAGCCTGAGCCTGAGCATGAGCCTGAGCCATCTATCACCAATCATGGTGCCCTCATTACACAGCAAGGATGTGGGCTTGACTTGAATTTGCCTTTGCCTGCCCCACCTCAACATGATTCCTCCTCTCCCCTCGCTCTTGAATTGAGATTGGGACTTTAA | 855 | 0.5357 | MSNFNSNSDSPAATSPSSAQKHHSRNARKRRTSTTTKLITIIDHNIAFKPKYPDAPAITRPCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNLQRQPPPEIMTQEDHEIAAGLLLLAKGDNATRTPCGSGHQEYSEGEWAGSSGLSGRFECPSCNKVFGSHQALGGHGASHKNLKGCFASDITNDGEDDESEEMEMVLEGHKCSICLRVFSSGQALGGHMRCHWDKGEPEPEPEHEPEPSITNHGALITQQGCGLDLNLPLPAPPQHDSSSPLALELRLGL | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere06g0018 | 284 | MobiDBLite | consensus disorder prediction | 261 | 284 | - | - | |
| Dere06g0018 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 152 | 179 | IPR013087 | - | |
| Dere06g0018 | 284 | Pfam | C2H2-type zinc finger | 151 | 175 | - | - | |
| Dere06g0018 | 284 | Pfam | C2H2-type zinc finger | 204 | 229 | - | - | |
| Dere06g0018 | 284 | Pfam | C2H2-type zinc finger | 61 | 84 | - | - | |
| Dere06g0018 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 154 | 174 | IPR013087 | - | |
| Dere06g0018 | 284 | SMART | c2h2final6 | 204 | 226 | IPR013087 | - | |
| Dere06g0018 | 284 | SMART | c2h2final6 | 60 | 82 | IPR013087 | - | |
| Dere06g0018 | 284 | SMART | c2h2final6 | 152 | 174 | IPR013087 | - | |
| Dere06g0018 | 284 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Dere06g0018 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 206 | 226 | IPR013087 | - | |
| Dere06g0018 | 284 | Gene3D | Classic Zinc Finger | 149 | 226 | - | - | |
| Dere06g0018 | 284 | SUPERFAMILY | beta-beta-alpha zinc fingers | 61 | 85 | IPR036236 | - | |
| Dere06g0018 | 284 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 15 | 284 | - | - | |
| Dere06g0018 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 62 | 82 | IPR013087 | - | |
| Dere06g0018 | 284 | SUPERFAMILY | beta-beta-alpha zinc fingers | 204 | 229 | IPR036236 | - | |
| Dere06g0018 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 204 | 231 | IPR013087 | - | |
| Dere06g0018 | 284 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Dere06g0018 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 60 | 87 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere06g0018 | Dere-ChrDere06 | 308292 | 309146 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere06g0018 | 2 | 284 | C2H2 Transcription Factor Family | AT2G17180 | 43.279 | 3.63e-68 | 211 |
Transcription factors information