Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2943 ATGGACCATCCTGCATTCGTGGACGATGACATAGTCGGACAAGTTGATTGGGGCAACATCTTTGATGAGAGCTTGTTCTCCCCAATTATCGCCGATGGGCCTTTGCCTGATCCGTCCCCTGATTCATATTTTGTCGAGATTGAGAACTTGTTGATGGATGATAAAAACGACCCCGTTTCCGAAGCCTCCTCTGAGTCTGGTGCTAAAGAGTATTGTGATAAGTTTTTGGCAGGTATACTTGTCGGTGAGGGGAGAGACGATTCAAGCCCCTCCGGTAAATATGTTATTGATACTCCTTTGGACAAGGACAAAATCGATGCAACTGCCGATGACCCTGTCTCCAAAAAGCGAGCAAGGAAGATTAGAAATAGAGATGCTGCAGTAAGATCGAGGGAAAGGAAAAAGATGTATGTGAAAAATCTTGAGATGAAATCCAGGTATCTTGAGGGGGAATGCAGAAAACTGGGGCATCTGCTTCCGTGCTGCTATGCTGAGAACCATGCTTTACGTCTTTGTTTACAATCAAGCTGTGCATTTGGTGCTTCTATGACCAAGCTGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCATGGGCATCATCTGCCAACTCAGTCTATACCTGATGCCTTGGTTGATTCTGGAACCGATAAGAGTGGCACTGGAAACCATGGAACAGAAAGGCCAAGGAAGTGTGGCTCTAAAAGAGGCAGGAAATAAGATCTTGGGTTATTTTGTGGTGCAGTCGTTTATAAACAGTAGAAGATCCCGAGCCTCGAGAACAAAGATGAAAATGAATTTTCTTGTGTTTAAGCTTTGA 840 0.4524 MDHPAFVDDDIVGQVDWGNIFDESLFSPIIADGPLPDPSPDSYFVEIENLLMDDKNDPVSEASSESGAKEYCDKFLAGILVGEGRDDSSPSGKYVIDTPLDKDKIDATADDPVSKKRARKIRNRDAAVRSRERKKMYVKNLEMKSRYLEGECRKLGHLLPCCYAENHALRLCLQSSCAFGASMTKLESAVLLLESLLLGSLLWFMGIICQLSLYLMPWLILEPIRVALETMEQKGQGSVALKEAGNKILGYFVVQSFINSRRSRASRTKMKMNFLVFKL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2943 279 Gene3D - 114 175 - -
Dere05g2943 279 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 155 IPR004827 GO:0003700|GO:0006355
Dere05g2943 279 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 75 224 - -
Dere05g2943 279 Pfam bZIP transcription factor 115 155 IPR004827 GO:0003700|GO:0006355
Dere05g2943 279 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 133 IPR004827 GO:0003700|GO:0006355
Dere05g2943 279 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
Dere05g2943 279 CDD bZIP_HY5-like 116 167 - -
Dere05g2943 279 SUPERFAMILY Leucine zipper domain 115 171 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2943 39 190 bZIP Transcription Factor Family AT1G42990 37.705 5.20e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g2943 bZIP_1 2.1e-09 CL0018