Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2901 ATGATTGAAAAGAAGGAGGAGTTTCTCATTGTGGCGCCATTTGAGTGCGCATGGCGAAAGGATTTGAAATTCCGAGAAGCAGGTCGTGGTTGCGTCGTTTTCGAAGCTTTCGCGCGGAATGATATCACACTGGTTTTCCGGGAAAATGTGGGAAGCCGACACTACCATTATAAAAGAGATAGTAGTCCGCACTATACCGTCATTTTGGGAAGTCATAGGAATAGACGGCTGAGAATTGAGGTTGATGGAAAAACTGTTGTTGATGTGGGTGCTGGACTTTGTTGCTCTTCATCGTTCCAGAGTTATTGGATCAGTATATATGATGGGTTGATTAGCATCGGTAAGGGAAAATACCCGTTCCAGAATGTTGTCTTCCAGTGGCTGGATTCTAATCCTAATTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAATGTTAATGTGCTGTCATTAACACACAATCATATGTCCCAGTGGAAACACGTGAGTTTTGGTGATTATGAAGTTGAGGAGGAGGGTGACGAGGAGTTGGGAGCCAAACCGATGGACTATGACAATTGGGGGCTGAAAAATTTTCTGGAGAGCTGGGAATTGTCTGACGTTTTATTTATTGTTGGTGCAGAGGAAAGACCTGTACCTGCTCATAAGGCTATTTTAGCAGCATGTGGGGATTTTCCTATAGCCTCGTCGTTCTTTGTTATCTCGCTGCCCACAGTAACTTATCCGGTTCTCCATGCGCTGCTTCAGTACATCTACACTGGCTGGACCGAGGTTTCTCAGGCACAACTTGGTTCCTTGAGGGCTCTAAGTCTACAATTTGAACTGATGTCACTGGTGAAACAATGTGAAGAGACTATGGAACGGTTTAAGTTAAATCAGAAGTTGTTTGTCTCGGGCAAGAATGTGGAGTTATCATATCCAAGCACCAGGCTTCATTGTTGTACGACTCTGTCCTCACTTCCTGTCAGTAGTCAGAGACTTAAACAACTACAATTAACTGGTCAGTATAGTGATGTAGACATATATATTGAGGGTTATGGACTAATTGCCCAGGCACATAAAATTTTTCTCAGTTTATGGAGCATCCCATTTGCCAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCTTCAGAGATTACTTTGAGGGATGTGCCACCAGAAGCTTTCAAGGCTATGCTTGATTTTATATACAGTGGGGAACTAAAAGATGAAGTTAATATAGATTCTGGTGCTTTGTTGCTTGATCTGCTTTTTTTGGCTGACCAATTTGGAGTGACTCTTCTTCACAAAGAATGCTGTAAAGTGCTTCTAGAATGCCTCTCAGAGGGATGGAGTTCTATTGGGTGA 1371 0.426 MIEKKEEFLIVAPFECAWRKDLKFREAGRGCVVFEAFARNDITLVFRENVGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVGAGLCCSSSFQSYWISIYDGLISIGKGKYPFQNVVFQWLDSNPNYNVQYIGLCSWDKHVGYRNVNVLSLTHNHMSQWKHVSFGDYEVEEEGDEELGAKPMDYDNWGLKNFLESWELSDVLFIVGAEERPVPAHKAILAACGDFPIASSFFVISLPTVTYPVLHALLQYIYTGWTEVSQAQLGSLRALSLQFELMSLVKQCEETMERFKLNQKLFVSGKNVELSYPSTRLHCCTTLSSLPVSSQRLKQLQLTGQYSDVDIYIEGYGLIAQAHKIFLSLWSIPFAKMFTNGMSESMSSEITLRDVPPEAFKAMLDFIYSGELKDEVNIDSGALLLDLLFLADQFGVTLLHKECCKVLLECLSEGWSSIG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2901 456 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Dere05g2901 456 SMART BTB_4 344 448 IPR000210 GO:0005515
Dere05g2901 456 SMART BTB_4 206 297 IPR000210 GO:0005515
Dere05g2901 456 Pfam Farnesoic acid 0-methyl transferase 53 148 IPR022041 -
Dere05g2901 456 SUPERFAMILY POZ domain 331 445 IPR011333 -
Dere05g2901 456 SUPERFAMILY POZ domain 195 294 IPR011333 -
Dere05g2901 456 CDD BTB_POZ_ZBTB_KLHL-like 343 414 - -
Dere05g2901 456 ProSiteProfiles BTB domain profile. 206 267 IPR000210 GO:0005515
Dere05g2901 456 Gene3D Potassium Channel Kv1.1; Chain A 194 307 IPR011333 -
Dere05g2901 456 Gene3D Potassium Channel Kv1.1; Chain A 323 450 IPR011333 -
Dere05g2901 456 PANTHER OS05G0345500 PROTEIN 2 447 - -
Dere05g2901 456 Pfam BTB/POZ domain 196 294 IPR000210 GO:0005515
Dere05g2901 456 Pfam BTB/POZ domain 334 446 IPR000210 GO:0005515
Dere05g2901 456 CDD BTB_POZ_ZBTB_KLHL-like 205 280 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dere05g2901 BTB 2.1e-20 CL0033