Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2893 ATGACACTATCGACGCAGAAAATGGAAGTCGAAATAATCTCCAGCCAATGCATCAAACCCTCATGCCCAACTCCTGAACACCTCAAAATCCACAAGCTCTCTCTCTTAGATCAGTTTATCCCTTCCCTCAATATACCCATGATTCTCTTCTATACTACTGACGATGATAATGATACCCTTCGCCAGAGACTGCAAATCCTAAAGCAATCCTTATCAGAAACCTTGACTCGCTTCTACCCCTTCGCCGGAATCATCAAGGACAAGCTTTCCATAGACTGCAACGACCAAGGGGTCCACTATTCTGAGGCCAAAGCAAATTCTAGTCTGATCGAGCTCTTCAAACAACCCAGTCTGGCATCATTATTACTGAAACTTCTTCCTACCCAACCCAGTTGGCACGAATCCACCGAAGGAGTTCAAGTGGCTATGATACAAGTGACCAGTTTCCCATGCGGTGGTTTAGCCATCGGAGCCATTGTGTCCCACATGATAGCCGACGGAGCCGCAACAAGCTTCTTTCTCAACAGCTGGGGTGCCATGGCTCGTAAGGCTATTCATCACTATGCTTCACCAAATTTTGATGCTCCACCTGCCATCTTCCCCCACAGCCATGCGTTGCCAGAGCAGGCAAGCATGATGGCTCTGTTTGGACCCTTCTTGAAAACAGGTAAGAGCGCCACAAGGAGGCTTGGGTTTGGGCCCACAGCTATAGCACAGCTGAGGGCCAAGGCCTCAAGCTCAAGAGTGCCGAATCCTACGCGAGTTGAAGCTGTATCGGCTTTGATCTGGAAGTCTATAATGGCAGCTCTGAAGGCTAACAATGGTTTGGTGACCCAAGCCGTAAACATGAGGCGGAGGGCAGCTCCAGCATTTCCAGGATGTTATATGGGGAATTTCCTGTGGGTAGCGCCCTGCAGCTTAAGGGCAGCAAAGGAGGAGATGGGAACTGAGCTACCCAACTTGGTGATCAAATTGAGGGAAGCAATAACAAAAGTCAACTCTGACTTTGTGAAAGGCTTGGAAGGGGAAGGAGGGAGTATCAGATCTGGTGAGGTGCTTAAAGAGATGGTGGAGGAGACTTCGAGTTTTGCAGGCTCATGTGGTAGCCATGGGGTGGCTTATGTGGGATATTCGAGTTGGTGTAGGTTTGGGCTTTACGATATTGATTTTGGATGGGGGAAGCCAGCGTGGGTGGCTTGCACCGGTTCAAGTGATGCTGTCACTTTGTTTGTTAACACCGTCATTCTAATGGATACGCCGTCAGGCGATGGAATAGAAGCTTGGGTTTATTTAGAAGACCATGATATGGCCGTACTGGAACAAGACAAGGGCCTCCTTGCTTTCGCCGCTTTGGATCCAAATCCTCTGGATTCTAAGGTCGCCGTGCTTGCCCCCAAATAA 1401 0.4911 MTLSTQKMEVEIISSQCIKPSCPTPEHLKIHKLSLLDQFIPSLNIPMILFYTTDDDNDTLRQRLQILKQSLSETLTRFYPFAGIIKDKLSIDCNDQGVHYSEAKANSSLIELFKQPSLASLLLKLLPTQPSWHESTEGVQVAMIQVTSFPCGGLAIGAIVSHMIADGAATSFFLNSWGAMARKAIHHYASPNFDAPPAIFPHSHALPEQASMMALFGPFLKTGKSATRRLGFGPTAIAQLRAKASSSRVPNPTRVEAVSALIWKSIMAALKANNGLVTQAVNMRRRAAPAFPGCYMGNFLWVAPCSLRAAKEEMGTELPNLVIKLREAITKVNSDFVKGLEGEGGSIRSGEVLKEMVEETSSFAGSCGSHGVAYVGYSSWCRFGLYDIDFGWGKPAWVACTGSSDAVTLFVNTVILMDTPSGDGIEAWVYLEDHDMAVLEQDKGLLAFAALDPNPLDSKVAVLAPK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2893 466 PANTHER F21J9.9 11 449 - -
Dere05g2893 466 Gene3D - 224 446 IPR023213 -
Dere05g2893 466 Gene3D - 6 212 IPR023213 -
Dere05g2893 466 Pfam Transferase family 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2893 Dere-ChrDere05 39458551 39459951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2893 8 441 Monolignol Biosynthesis Gene Families AT5G48930 26.144 3.02e-30 120