Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2882 ATGATAAGCTTAGGAAGGTTAATAGCCATAGCCAGGAAGTGGCAAAGAGTGGCTGGAATCAAGAGGAAAGCCATTTCACTGCCCAGAATGAGGTTGAGGCAGAAGCACAAGGTAGCCGATAAAGGTCACTTTGTGGTGTATAGCATTGACAAGGGACGCTTAGTGATACCATTGGCATATCTGAGGAGCAACATATTCAAAGAGCTGTTTAGGTTATCTGAAGAAGAATCCGGCCTTCCTTCCGATGGTCCAATCACTTTCCCTTGTGACGCTGCCTTCATGGACTATCTTCTTTCTTTCGTACGTAAAAATGGGTGTTTGGAGCTTCAGAAGGCGGTGCTCTTGGGCCTACTATCTTCTCATCACTGTGTGCCACCCTCGCCTCATTACCCTCACGCTTATCCTTCAATTGCTATCTCTGGGGCTTCGTAA 432 0.4676 MISLGRLIAIARKWQRVAGIKRKAISLPRMRLRQKHKVADKGHFVVYSIDKGRLVIPLAYLRSNIFKELFRLSEEESGLPSDGPITFPCDAAFMDYLLSFVRKNGCLELQKAVLLGLLSSHHCVPPSPHYPHAYPSIAISGAS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2882 143 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 127 IPR003676 GO:0009733
Dere05g2882 143 Pfam Auxin responsive protein 13 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2882 Dere-ChrDere05 39371461 39371892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2882 41 104 Calmodulin-binding Proteins AT5G20810 36.923 1.08e-07 47.0