Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2870 ATGGTGGACGAGAGCGAAGCCGCGATTACCATCGACGAACCTCAGTTGAAGCATGTTGCCCCAACCGCCGCTGAACACCAGCTCTCCGACGACCTCAAGGATGGTTCCTGCGAGTTAAATGACGCTGTCCACGGTTTGCCTTCGAACGCCGTCAAGGACTTATTGTCCCAAGGGATATGTGCTCGTTGCATCTTTCGGCTGTTTGGGGTCCAAGGACGCATCTATTCATGCTCCTACCTTTCATCATCAATGATTAGTTCCATTCTTGGAGGACCAACTGATTTGGACAGCGATATGGTGGATAGTTGTTTAAAAAAGTGTGCCAACTTGAGTTGTTCCAAGGAATCCAAATTTGATCTTAAACTTTGCATCCTTTGCCTAGGGATCCTGCAGTTCAGATATTTTTATGACACAAAGACGCAAGTGAAAAAGGATACTCCTGATGAGATGGCTGTCTTAATTGCTGACATAATTAAAGAGGAGGGCCATAAGATTGATAACTTTTCCCTCGAAGTTTCAATACCACCTGTTATCCTTGAAAATGAAAACTCAATTCAGTCATATATAAAAATAAAATACGGAGCTGAGCCGTGGTTCCAAGAAAAGTTACATTTTGGATGCATTTCTACAAAGGATGCCTTAAAATTTTCTCTAGTATATCCTCTTGAAAATCTTCTGGACCGTAAATCAAGTATGAACTCTTTCCGTATCCGTTTGACATATGGTCACACTAACTCATCAAAAGAGGCTGAGAAGTGCTCAGATTGTAATAAGAGTTGCAAGAGAAGCAAAAAAGGTGTGGACAACAGTGTGGATGCTGCCAATGATTCCATAGTTTCTGGCTGTGAATTATCAGATTCTTTCTTAGGTGAATCCAATCTAGTTGGAGAAAAGCCTTCTGACAGTTTGCTAGAAAATGAATCCTTTGAGTCCTGTACACTTTTGCTACGAAAGGCAATTGAACCTTGCCATCTTACGGTCTATTGCTGCAGGGCACCTATCTATTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATAATTGATGATGAGAGAATGGGGGAAGCATCGGTTGAGGAAATAATTGGTGGAAACATCCTCCTAGCATGCCGTGGTGATAACTATAAGTTTCATGCTGCTGGAAGAGAAGATATTGATGTCCGAATGTTGGGTCCAGGCAGGCCGTTTCTTGTTGAGGTGCAAAATGCGCGACTAGTCCCATCTGAGCTGGTTTTACAAGATATAGAGAAGATGATAAATAACTTGGAAAAAAAATTGGTTAGAGTGAAAAATCTGAAAACAGTTGGTAGCCATGGTTGGAATCTTATGCGTGAAGGAGAGGCAGAGAAACAGAAGCAATACGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAAAGATGAAGATTTGCAATCTGTGTGTTCACTCAAGGATTTGAAAATTTTGCAGAGGACTCCAATCAGAGTGCTACATCGTCGTAGTCCATTAGAGCGTGAAAAGATTATTCATTGGATGAAAATAGAAACAATTGCTGGAAGTTCCCAGTATTTTCTGCTGCATTTATGTACACAGGCAGGGACCTATATCAAGGAATTTGTTCACGGAGATCTTGGACGCACCCATCCTAGTATTGGATCTATTTTGGGTTGTAGAGTTGAAATTTTACAGCTGGATGTCACAAATGTCAAAATGGACTGTTTCCTTCCCTAA 1725 0.4168 MVDESEAAITIDEPQLKHVAPTAAEHQLSDDLKDGSCELNDAVHGLPSNAVKDLLSQGICARCIFRLFGVQGRIYSCSYLSSSMISSILGGPTDLDSDMVDSCLKKCANLSCSKESKFDLKLCILCLGILQFRYFYDTKTQVKKDTPDEMAVLIADIIKEEGHKIDNFSLEVSIPPVILENENSIQSYIKIKYGAEPWFQEKLHFGCISTKDALKFSLVYPLENLLDRKSSMNSFRIRLTYGHTNSSKEAEKCSDCNKSCKRSKKGVDNSVDAANDSIVSGCELSDSFLGESNLVGEKPSDSLLENESFESCTLLLRKAIEPCHLTVYCCRAPIYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILLACRGDNYKFHAAGREDIDVRMLGPGRPFLVEVQNARLVPSELVLQDIEKMINNLEKKLVRVKNLKTVGSHGWNLMREGEAEKQKQYAALVWISRPLKDEDLQSVCSLKDLKILQRTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRVEILQLDVTNVKMDCFLP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2870 574 FunFam tRNA pseudouridine synthase Pus10 333 457 - -
Dere05g2870 574 PANTHER UNCHARACTERIZED 41 571 IPR039894 -
Dere05g2870 574 Gene3D - 333 457 - -
Dere05g2870 574 FunFam tRNA pseudouridine synthase Pus10 458 568 - -
Dere05g2870 574 Gene3D - 458 568 - -
Dere05g2870 574 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 324 568 - -
Dere05g2870 574 SUPERFAMILY Pseudouridine synthase 454 568 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Dere05g2870 574 Coils Coil 418 438 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2870 05 39287417 39293861 Dere05g2870 05 39287417 39293861 ECH