LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g2869	ATGCCCGACTTTGGAAGGCAGAGCGACTCACAAATGAGGGTAACGATGCTGTCATACGCTCGCCACGCGCGCGAGATTGTGAGTTCACATGCCTTTTTCGTTATTCCCCGAAATACACACCGCTCTCAGAACCTGGGTGTGTTAAGCTTCGACCCCTTTCCTGCTTTGACTCCCCGCAAGCGCGCACACAGGCCGCGTCTCCCGTTATTCAAATCTCATCTTCCTCTGTTTTTCTCTCCTTTTACTTTTCCTTCTTCAAGCCCTAGAATGAGTTCCTTCTGTGCCCTAGACGAGCCTCTGCAATATCCTCTTGCTCGTAGAGACGAGTCTGTCGTCGATGACTTCCATGGCGTTAAGATTGCTGACCCTTATAGATGGCTTGAAGATCCTGATGCGGAAGAAGTCAAAGAGTTTGTACAGAAGCAGGTTAAATTGACGGATTCCGTGCTTCAGATATGCGATACTAGGGAGAAGCTTCGTGAAAAGATCACGAAGCTTTTTGACCATCCTCGTTATGATGCTCCTTTCAGGCGAGCAAATAAGTACTTCTATTTCCATAATACCGGCCTTCAGCCACAAGACGTCCTTTATGTTCAGGATACTTTGGAGGGAGAACCAGCGGTTTTGCTTGACCCCAATGCCCTCAGTGAAGATGGAACCGTCTCACTGAATACACTCTCGGTGAGTGAGGATGCTAAGTACTTGGCCTATGGCCTTAGTTCAAGTGGTAGTGATTGGGTGACAATAAAGGTCATGCGTATTGAGGACAAGAATGTTGAGCCTGATGTTTTATCATGGGTCAAGTTTTCCTCTATAAGTTGGACACATGATAGCAGAGGTTTCTTTTACAGCCGCTATCCAGCACCCAAAGATGGAGGAGTAGCAGATGCTGGGACCGAGACAAATGCTAACCTTTATCATGAGCTTTATTATCATTTTTTGGGTACTGATCAATCAGAAGATATTCTATGCTGGAAAGATCCTGAAAATCCTAAATATATGTTTGGGGCAAGTGTTACTGATGATGGAAAGTATGTCCTCCTTTATATCGAAGAAGGGTGTGATCCAGTCAACAAACTTTACTACTGTGACATGACTGCTCTTCCCAATGGGCTGGAAAATTTTCGGAATGAAAATGCCCTACTCCCATTTGTCAAGCTTATTGATAAATTTGATGCACAGTATCATGCCATTGCTAATGATGACAGTGAATTTACTTTTTTGACTAATAAAGATGCTTCAAAATATAAACTAGTTCGAGTTGATCTGAAAGAACCAACTGCTTGGACCGATGTTCTCCCAGAATCTGAAAAAGATGTGCTTGAGTCAGCATGTGCTGTAAATGGTAACCAAATGATTGTGAGTTACTTGAGTGATGTGAAATATGTTCTGCAAGTGAGGGACTTAAAAACTGGTTCCTTGCTGCATCAATTACCAATTGACATTGGCACAGTTTCTGGACTTTCCGCACGGCGCAAAGATAGTGTAGTTTTCATAGACTTCACCAGCTTTTTGACTCCTGGTATCATATATCAGTGCAATTTGGATAATGAAGTTCCTGACATGAAGATATTTCGTGAAATTGTTGTTCCTGGGTTTGATCGCAGTGAGTTTCATGTCAACCAGGTTTTTGTACCTAGCAAGGACGGTACCAATATCCCAATGTTCATTGTTTCCAGAAAAAATATTATTTTGGATGGCTCACACCCTTGTTTGTTGTATGGATATGGCGGTTTTAATATTAATCTTACACCATCTTTCAGTGTCAGTCGCATTGTACTCTCAAGACATCTAGGTGCTGTTTTCTGCATAGCAAATATACGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCTCTTTCTAAGAAACAGAATTGTTTTGATGACTTCATTTCTTCAGCTGAATACCTTGTATCTGCTGGTTATACCCAACCCAGTAAGTTATGCATTGAAGGGGGAAGCAACGGTGGACTTCTTGTTGGGGCTTGCATAAATCAGAGACCTGATCTTTTTGGCTGCGCACTGGCTCATGTGGGTGTTATGGACATGCTACGATTCCACAAGTTTACAATAGGTCATGCTTGGACCTCGGATTATGGTTGCTCAGACAAGGAGGAAGAGTTCCACTGGCTAATAAAGTACTCGCCGTTGCATAATGTTCAGAGACCATGGGAAGAACATCCTGATAAATTAATTCAGTACCCATCAACCATGCTGTTGACCGCTGATCACGATGATCGTGTTGTTCCATTGCACACTTTGAAGTTTCTGGCGACCTTGCAGTATATTCTCAGTACCAGTTTGGAGAAAAGTCCCCAAACAAACCCTATAATAGGTCGCATTGAATGTAAGGCTGGACATGGAGCCGGCCGACCAACGCAGAAACTGATTGATGAGGCTACTGACCGCTATGCTTTCATGGCAAAAATGTTGGACGCGCATTGGACTGGATAG	2463	0.4344	MPDFGRQSDSQMRVTMLSYARHAREIVSSHAFFVIPRNTHRSQNLGVLSFDPFPALTPRKRAHRPRLPLFKSHLPLFFSPFTFPSSSPRMSSFCALDEPLQYPLARRDESVVDDFHGVKIADPYRWLEDPDAEEVKEFVQKQVKLTDSVLQICDTREKLREKITKLFDHPRYDAPFRRANKYFYFHNTGLQPQDVLYVQDTLEGEPAVLLDPNALSEDGTVSLNTLSVSEDAKYLAYGLSSSGSDWVTIKVMRIEDKNVEPDVLSWVKFSSISWTHDSRGFFYSRYPAPKDGGVADAGTETNANLYHELYYHFLGTDQSEDILCWKDPENPKYMFGASVTDDGKYVLLYIEEGCDPVNKLYYCDMTALPNGLENFRNENALLPFVKLIDKFDAQYHAIANDDSEFTFLTNKDASKYKLVRVDLKEPTAWTDVLPESEKDVLESACAVNGNQMIVSYLSDVKYVLQVRDLKTGSLLHQLPIDIGTVSGLSARRKDSVVFIDFTSFLTPGIIYQCNLDNEVPDMKIFREIVVPGFDRSEFHVNQVFVPSKDGTNIPMFIVSRKNIILDGSHPCLLYGYGGFNINLTPSFSVSRIVLSRHLGAVFCIANIRGGGEYGEEWHKAGSLSKKQNCFDDFISSAEYLVSAGYTQPSKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVQRPWEEHPDKLIQYPSTMLLTADHDDRVVPLHTLKFLATLQYILSTSLEKSPQTNPIIGRIECKAGHGAGRPTQKLIDEATDRYAFMAKMLDAHWTG	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g2869	820	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	570	588	IPR002470	GO:0004252\|GO:0006508
	Dere05g2869	820	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	625	644	IPR002470	GO:0004252\|GO:0006508
	Dere05g2869	820	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	597	621	IPR002470	GO:0004252\|GO:0006508
	Dere05g2869	820	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	655	675	IPR002470	GO:0004252\|GO:0006508
	Dere05g2869	820	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	737	759	IPR002470	GO:0004252\|GO:0006508
	Dere05g2869	820	SUPERFAMILY	alpha/beta-Hydrolases	540	764	IPR029058	-
	Dere05g2869	820	Gene3D	alpha/beta hydrolase	111	810	IPR029058	-
	Dere05g2869	820	FunFam	Prolyl endopeptidase	170	529	-	-
	Dere05g2869	820	FunFam	Prolyl endopeptidase	491	810	-	-
	Dere05g2869	820	Gene3D	-	170	529	-	-
	Dere05g2869	820	PANTHER	PROLYL ENDOPEPTIDASE	98	819	-	-
	Dere05g2869	820	SUPERFAMILY	Peptidase/esterase 'gauge' domain	99	518	-	-
	Dere05g2869	820	Pfam	Prolyl oligopeptidase, N-terminal beta-propeller domain	103	518	IPR023302	GO:0004252
	Dere05g2869	820	Pfam	Prolyl oligopeptidase family	585	815	IPR001375	GO:0006508\|GO:0008236

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g2869	Dere-ChrDere05	39281893	39286347	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g2869	562	702	Carbohydrate Esterase	AT5G36210	29.252	6.17e-06	48.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere05g2869	05	39281893	39286347	Dere05g2869	05	39281893	39286347	ECH