Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2860 ATGAGATATGGTCGATTATCTTTAGTAACACTACGGTATGCTCCAATTGAGGGAGGAAAGCTTGGTCTTGTATTGTGTGCTCTGCGTCATCTCTGGTTTAGTTCTTGCGTGCTCTCGTTAGACCTCTCAATGGAATTCCAGGACCAGAACATTGTTTTGTGCCTCTTGACTGTACTATTGAGCCAAGCCAGTATTTTCAGCGTTGGGAAAGATATATCTCAAGCGATAGGTTACATGATCCTGGCACATCTCGTGAATTTGTTTCATTTGACAATTTGGGACCCGGAATCGGTGAGGAGCTTAAGCAAAGACAGTAAGATGAGTTGGCCGTATCTTCCTTTGTATGTGATAATGGGGTTCTCGTGGGTAAGTGCTGTGTTTACGGAGAGTGCGGTGGTATCTTTGGGAATGTATTTGCTTGCTATTAGGTCGAATTTGGCCCTGTGCGATCATGAGGTGGTATCTTCGCTGTTGGGGCAGAGTTTTGATGAACATTTGGTGCTTCTTACTGGTCTCAGATTGTGCCAGGAAATCCAGCGTGAGGAAGCGGAAACATCAGGTGCTGCTGGGAATGGTGATTACTGGAGCAGAGACTCATTGAAGGAAGCTGATGATTATCGAACCCAAGAGGAAGGATGGGAATTGGTGGAGCATACTGTGTTGTTAATAGCAGCAGCATGCACGCTGAGGCAGGGACCAGAAGATGTGGATACATCGTTCCCCCTCAGAAGTTGGAGAAGCACTATTGAGTCTTCATCATGTAAGGGAGACACAGAGAGTTGCAGTAGCAGAGCACAGAATTTAGGGTGGAATATTAGTCCAAAGCAGAGGCTGAAGGTTGAAGTATACAACGAGGTTCTTATTAGACTTAGGGAATTGAATGTCCCGGAGGCTGCGGTTCCTGGTTTTGAAGATGAACTTTGGACTCATTTCTGTCGACTTCCAGCAAGGTATGCAATGGATATGAATGTGGAGAGAGCTCAAGATGTTATTATGCACAAAAGGCTGCTGCATATGGCACATGCCCCTGCTACCAGACCAGCTGTTGAAGTCCGTCTAGTTCAGGTTCGTTCTGCTTCTGGTGTGAGTTCTAGTAATTCTCTTCATTCAAACTCACAAAGAAAAGTCAGTCCACAAGATTCTCATATTCCAGGCAACATGAGCACCCATCCTGCCCCGGCCTTTGGGTCCTCAGCTAACTTTGAACTTGCTCTTCAAGCAAGCCAGTTACAAATTCAAGCTAATAATAGCAATTTGAAATTCTACACACATTATTCCCGGCCAATGCATGAGATTACAATATCAACAAACGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGATGTCCGAGACTGGGCTAAACATCCAAGAAGCACATGCCTTTTCCACATTGGATGGTTATTCATTAGATGTTTTTGTTGTTGGAGGTTGGTCTATTGAGGAGACTGAGAAGCTTAAACATGTACTGACAAAGAAAATTCAGAAACTTGAGAAGCAGCCTTTCTTCAAGGAAATTGGCAGTAAAACTGCAGAGCAAGAGCAAACTGGGATCAATAACGTCAATGTACCCATATGCGGAAATGTTGCATGGGAAATTGATGCAAGTTATCTGAAATATGGAAAGAAAATAGCATCTGGATCACTCTTTGATTTATATAAAGGTGTTTTCTATGACCAAGATGTGGCTATCAAAGTCCTTAAGACTGAGAACTTGAATGAAAATATACAAAGGGAGTTTGCTCAAGAGGCTCATATCATGAGTAAAATGTGTCACAAGAATGTTGTCAAATTCGTTGGTGCCTGTACAAAACCTCCTGACCTATTCATTGTCACAGAATACATGTCCGGTGGAAGTATATATGAGTTTCTGCATTTACAGAAGACTGTGCTTACTCTTCCATCTTCGCTCAAAATAGCAACTGATGTTTGCGAAGGAATGAACTATTTGCATCAGAATGATATCATACACAGGGACATCAAATCTGCTAATCTTTTGATGGATGAGAAAGGAGTAACGAAGGTTGCAGATTTTGGAGTAGCAAGAGTGGAAGATCAGTCCGGCATCATGACAGCAGAAACTGGAACTTATCGATGGATGGCTCCAGAGGTTATTGAACATAAACCATACAATCACAAAGCCGATGTCTTTAGCTTTGGAATTGTTCTGTGGGAGCTGCTCACAGGAAAGCTTCCTTATGAGCACTTGTCGCCATTGCAAGCAGCAGTTGGAGTGGTCCAGAAGGGATTGAGGCCGAAAATTCCGAGGCACACGCATCCTATGTTAGTGGAATTGCTCAATCGATGCTGGCACCAGGATCCCTCTTTGAGACCCGAGTTCTCAGAAATTCTAGAGTTTCTGCACGATTTCACTGAGAGTGTATGGGGAGACTCTCTACTCTAA 2406 0.4339 MRYGRLSLVTLRYAPIEGGKLGLVLCALRHLWFSSCVLSLDLSMEFQDQNIVLCLLTVLLSQASIFSVGKDISQAIGYMILAHLVNLFHLTIWDPESVRSLSKDSKMSWPYLPLYVIMGFSWVSAVFTESAVVSLGMYLLAIRSNLALCDHEVVSSLLGQSFDEHLVLLTGLRLCQEIQREEAETSGAAGNGDYWSRDSLKEADDYRTQEEGWELVEHTVLLIAAACTLRQGPEDVDTSFPLRSWRSTIESSSCKGDTESCSSRAQNLGWNISPKQRLKVEVYNEVLIRLRELNVPEAAVPGFEDELWTHFCRLPARYAMDMNVERAQDVIMHKRLLHMAHAPATRPAVEVRLVQVRSASGVSSSNSLHSNSQRKVSPQDSHIPGNMSTHPAPAFGSSANFELALQASQLQIQANNSNLKFYTHYSRPMHEITISTNDKPKLLSQLTSLMSETGLNIQEAHAFSTLDGYSLDVFVVGGWSIEETEKLKHVLTKKIQKLEKQPFFKEIGSKTAEQEQTGINNVNVPICGNVAWEIDASYLKYGKKIASGSLFDLYKGVFYDQDVAIKVLKTENLNENIQREFAQEAHIMSKMCHKNVVKFVGACTKPPDLFIVTEYMSGGSIYEFLHLQKTVLTLPSSLKIATDVCEGMNYLHQNDIIHRDIKSANLLMDEKGVTKVADFGVARVEDQSGIMTAETGTYRWMAPEVIEHKPYNHKADVFSFGIVLWELLTGKLPYEHLSPLQAAVGVVQKGLRPKIPRHTHPMLVELLNRCWHQDPSLRPEFSEILEFLHDFTESVWGDSLL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2860 801 SUPERFAMILY Protein kinase-like (PK-like) 525 788 IPR011009 -
Dere05g2860 801 SUPERFAMILY ACT-like 429 501 IPR045865 -
Dere05g2860 801 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 278 791 - -
Dere05g2860 801 CDD STKc_MAP3K-like 545 788 - -
Dere05g2860 801 MobiDBLite consensus disorder prediction 362 390 - -
Dere05g2860 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Dere05g2860 801 PRINTS Tyrosine kinase catalytic domain signature 613 626 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 PRINTS Tyrosine kinase catalytic domain signature 759 781 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 PRINTS Tyrosine kinase catalytic domain signature 696 706 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 PRINTS Tyrosine kinase catalytic domain signature 715 737 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 PRINTS Tyrosine kinase catalytic domain signature 650 668 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 ProSiteProfiles ACT domain profile. 431 512 IPR002912 -
Dere05g2860 801 SMART serkin_6 539 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2860 801 FunFam Kinase suppressor of Ras 1 529 616 - -
Dere05g2860 801 Gene3D Transferase(Phosphotransferase) domain 1 618 797 - -
Dere05g2860 801 Pfam Protein tyrosine and serine/threonine kinase 539 788 IPR001245 GO:0004672|GO:0006468
Dere05g2860 801 ProSiteProfiles Protein kinase domain profile. 539 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2860 801 Coils Coil 481 501 - -
Dere05g2860 801 Gene3D Phosphorylase Kinase; domain 1 532 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2860 Dere-ChrDere05 39195202 39206028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2860 259 798 MAP Kinase Kinase Kinase AT4G35780 57.875 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere05g2860 PK_Tyr_Ser-Thr 1.5e-69 CL0016