Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2833 ATGCAGCGCTTATCTTTCAGTTGGGAGAAACTAGTGCAGCTAGTTTTGATATTGGTGGCCATGAAGGAAATACAAAGTGAAGCAGCAGGAGTTAATGGAACAATCCCAGCACTGTTTGCATTTGGAGATTCGATCCTTGATACGGGCAATAACAACAATCTTGACACGCTTAGTAAGTGCAATTATCCACCCTATGGAAGGGATTTCATAGGAGCCCAACCTACCGGAAGATTCTGTGATGGCAAAGTTCCCACAGATTTGATAGCGGAGGCCTTGGGAATCAAAGAAACTGTGCCCGCGTATCTGGACCCAATCCTCCGGAGAGAAGACCTCAGTACCGGAGTTTGCTTCGCTTCAGGTGGCTCTGGCATTGACGATCTCACATCCTCCACACTGAGAGTGTTATCACTATCCACCCAACTTCAAAATTTCCAAGACTACATCGGAAAGCTAAGAGGAATTATCGGAGAAGAAAGAACTAATAGCGTCATATCCAACAGCTTATATCTGATTTCAGCCGCCAATAATGACATTGCTATTACTTATGCTAACACGAGAAGACTTGAGTTTGATTTTCCTACTTATTCCAATCTTTTAGTTGACGGGGCTTCTACTTTCTTGAAGAATCTGTATGGACTCGGAGCTCGACGAATCTGGGTTTTAAGCACATTGCCACTGGGATGCTTGCCTGGAGTTAGAGCTGTAGAAGGAGGATTGAGTGGGCAATGTGTAGATACTGTCAATGAAGAGGCGCAATTATTTAATTCCCAATTATCATCGGAGCTCGTTTCTATCAAAGGAAGCCTTGTGGATTATAAGCTTGACTTCATTGATATGTACAGCCCTCTTCTTGATCTCGTTCAGAATCCTCGAAATTCAGGGTTCGAGAATGGGGTGAATGGGTGTTGTGATACTGCAACTTCAGCACTATGTAATCCACTAAATCCTTTCACCTGCGCAAATCCCTCCAAATACGTTTTCTGGGATTCTGCTCACCCCACCCAAGCAGCTTACGAGCACATTGTCTCCAATATACTTCAAACGCACAACTTGTCCACTATTTTAGCTAACTAA 1074 0.4376 MQRLSFSWEKLVQLVLILVAMKEIQSEAAGVNGTIPALFAFGDSILDTGNNNNLDTLSKCNYPPYGRDFIGAQPTGRFCDGKVPTDLIAEALGIKETVPAYLDPILRREDLSTGVCFASGGSGIDDLTSSTLRVLSLSTQLQNFQDYIGKLRGIIGEERTNSVISNSLYLISAANNDIAITYANTRRLEFDFPTYSNLLVDGASTFLKNLYGLGARRIWVLSTLPLGCLPGVRAVEGGLSGQCVDTVNEEAQLFNSQLSSELVSIKGSLVDYKLDFIDMYSPLLDLVQNPRNSGFENGVNGCCDTATSALCNPLNPFTCANPSKYVFWDSAHPTQAAYEHIVSNILQTHNLSTILAN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2833 357 Gene3D SGNH hydrolase 25 352 IPR036514 -
Dere05g2833 357 CDD SGNH_plant_lipase_like 36 347 IPR035669 -
Dere05g2833 357 PANTHER GDSL ESTERASE/LIPASE EXL3 19 345 - -
Dere05g2833 357 Pfam GDSL-like Lipase/Acylhydrolase 38 343 IPR001087 GO:0016788
Dere05g2833 357 FunFam GDSL esterase/lipase APG 27 350 - -
Dere05g2833 357 SUPERFAMILY SGNH hydrolase 38 348 - -
Dere05g2833 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 38 49 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2833 Dere-ChrDere05 38963153 38964849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2833 12 347 Pollen Coat Proteome AT1G75910 43.109 6.41e-87 264