Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2831 ATGGGTCTGTTCATGAAGTTCCTGACTCGCAGATCAGTGCTCCGTTTAATATTGCTATTAGTTGCTTCGAGCAAAACAATGGGTTTGGTGAAGTTGCCACCAAATGTTTCAGTTCCAGCAATCTTTGCGTTTGGAGATTCGATCATGGATACGGGCAACAATAACAACATCAAATCGCTGGTGAAGTGTAATTTCCCTCCTTATGGTCAAGATTTCGAGGGAGGCAAACCAACTGGCCGATTTTGCAATGGAAAGGTTCCATCAGACCTCATAGTTGAGGAGTTGGGTATTAAGGAAGTTTTGCCAGCATATTTGGATCCAAATTTGAAGCCTAATGATCTTGTTACTGGCGTCTGCTTTGCCTCCGGTGCCTCAGGATACGATCCTTTGACACCAAAAATTGCGTCAGTTCTACCACTATCGACTCAATTAGAGATGTTCAAAGAATACATAGGGAAGCTGCACAGAATTGTTGGAGAGGAAAGAACAAAGTTCATCATAGCCAACAGTGTTATTCTTGTGGTCTCTGGCAGCGACGATATTGCCAACACATATTTTGTTGCCCGCGTTAGACAACTCCAATACGATGTTCCTGCTTACACTGATCTTATGGTCAATTCAGCCTCTAATTTTCTCAAGGAATTATATGAACTAGGGGTACGGAGGATTGGAGTATTCAGTGCACCCCCAATTGGGTGTGTGCCATCGCAGAGAACTCTTGCTGGGGGCAAAGCAAGAGAGTGTGCAGAAAATTACAATGAGGCAGCAAAGTTGTTTAACTCCAAACTGTCAAAGAAGCTGGATTCTCTTAACAGGGATTTGCCAAACAGCAGAATTGTTTATATTGATGTTTACTCCCCTCTACTTGATATCATTCTAAACTACGAAAAATATGGCTTCAAAGTGGTGGACAAAGGATGCTGTGGCACAGGAATATTAGAGGTTGCGGTGTTATGTAACCCATTGGATCGCACTTGTCCTGACGTTTCCAACTACTTGTTTTGGGATAGTTATCATCCCACTGAAGCAGCGTACAGGAAGCTCATAGGTCCACTCCTTACAAAATATCTGAACCAATTCTTGTGA 1086 0.4282 MGLFMKFLTRRSVLRLILLLVASSKTMGLVKLPPNVSVPAIFAFGDSIMDTGNNNNIKSLVKCNFPPYGQDFEGGKPTGRFCNGKVPSDLIVEELGIKEVLPAYLDPNLKPNDLVTGVCFASGASGYDPLTPKIASVLPLSTQLEMFKEYIGKLHRIVGEERTKFIIANSVILVVSGSDDIANTYFVARVRQLQYDVPAYTDLMVNSASNFLKELYELGVRRIGVFSAPPIGCVPSQRTLAGGKARECAENYNEAAKLFNSKLSKKLDSLNRDLPNSRIVYIDVYSPLLDIILNYEKYGFKVVDKGCCGTGILEVAVLCNPLDRTCPDVSNYLFWDSYHPTEAAYRKLIGPLLTKYLNQFL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2831 361 FunFam GDSL esterase/lipase APG 30 357 - -
Dere05g2831 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Dere05g2831 361 CDD SGNH_plant_lipase_like 39 346 IPR035669 -
Dere05g2831 361 PANTHER GDSL ESTERASE/LIPASE EXL3 20 349 - -
Dere05g2831 361 Pfam GDSL-like Lipase/Acylhydrolase 41 348 IPR001087 GO:0016788
Dere05g2831 361 Gene3D SGNH hydrolase 32 358 IPR036514 -
Dere05g2831 361 SUPERFAMILY SGNH hydrolase 171 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2831 Dere-ChrDere05 38952617 38954581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2831 35 358 Pollen Coat Proteome AT1G75910 40.673 1.75e-78 243