Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2813 ATGTTCTTTAGAGTTAATAATTTGCATGTGATGGATTGGCTAGGTGCATCGGGGGCTACCTTTGCTCTGATTAACAAGTGCGAATACACAGTGTGGCCTGGAATTCTGGCCAATGCAGGCCGCTCCAGACTGGACACCACCGGATTTGAGCTCCAACCCGGTGGTTCTCGGAGTTTCGGAGCTCCACCCAACTGGTCGGGAAGATTCTGGGGCCGAACCGGTTGTACATTCGACCCGAATACCGGACAGGGCAGCTGCGTCACAGGGGATTGTGGCTCCAACCAGGTTGAATGCAATGGGGGAGGAGCAACCCCACCAGCAACACTAGCGGAGTTCACAATCGGGTCGGGCACTCAGGATTTCTACGACGTCAGCCTCGTCGACGGCTACAATTTGCCTATGCAGGTGGATGCGGGTGGCGGGTCGGGCTCCTGTGCGTCCACTGGTTGCGTGGCAGATCTGAATCGACGGTGCCCGAATGAGTTGCGGGTCGGGGACGGTGCGGCCTGTAAGAGTGCATGTGAGGCATTTCGGAGCCCCGAATACTGCTGCAGCGGCGCGTATGCCTCACCCGCCACCTGTAAGCCGTCGGTTTATTCGCAGATATTCAAATCCGCGTGTCCCAAATCCTACAGCTACGCATACGACGACGCTACGAGTACATTTACCTGTAGTGGAGCGGATTATACCATTACATTCTGCCCTACAACAGCAAGCCAGAAATCGTCAAGAGATTCAGCTCCAGAAAATGGGACAGGGGATGTGCCAATTGTAATAGACAGTCCATGGTTTCCAGACTTTTTCATTTCACTTTCGTCCAAGTCATTGTCTTGCTCATCCTCGTCCATTGCCACTCTCACTGTGCTCATCTTCATCTCTATGCAATACTTGAGATTATAA 900 0.5311 MFFRVNNLHVMDWLGASGATFALINKCEYTVWPGILANAGRSRLDTTGFELQPGGSRSFGAPPNWSGRFWGRTGCTFDPNTGQGSCVTGDCGSNQVECNGGGATPPATLAEFTIGSGTQDFYDVSLVDGYNLPMQVDAGGGSGSCASTGCVADLNRRCPNELRVGDGAACKSACEAFRSPEYCCSGAYASPATCKPSVYSQIFKSACPKSYSYAYDDATSTFTCSGADYTITFCPTTASQKSSRDSAPENGTGDVPIVIDSPWFPDFFISLSSKSLSCSSSSIATLTVLIFISMQYLRL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2813 299 PANTHER OS03G0233200 PROTEIN 16 235 IPR001938 -
Dere05g2813 299 Gene3D Thaumatin 19 235 IPR037176 -
Dere05g2813 299 Pfam Thaumatin family 25 235 IPR001938 -
Dere05g2813 299 PRINTS Pathogenesis-related protein signature 120 136 IPR001938 -
Dere05g2813 299 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Dere05g2813 299 PRINTS Pathogenesis-related protein signature 225 234 IPR001938 -
Dere05g2813 299 PRINTS Pathogenesis-related protein signature 20 32 IPR001938 -
Dere05g2813 299 SMART tha2 21 235 IPR001938 -
Dere05g2813 299 FunFam THAUMATIN-LIKE PROTEIN 1 19 235 - -
Dere05g2813 299 CDD TLP-PA 20 234 - -
Dere05g2813 299 ProSiteProfiles Thaumatin family profile. 18 235 IPR001938 -
Dere05g2813 299 SUPERFAMILY Osmotin, thaumatin-like protein 19 235 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2813 Dere-ChrDere05 38789389 38790756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2813 1 252 Receptor kinase-like Gene Family AT5G38280 46.565 3.21e-73 236