Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2795 ATGGCTCTCCTAACTTTCTTGCCCGAACAGTCAGACTCAGACCCCAAATCACAAGTTTCGAAACGCAAGCGAAAGCAGCAGAAGCAGAAACCACTGTCTTCATGGGATCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCGAGAGTGCACGACCCCTCCAAAAACCCCACCCCATTGGGCTACTCCAAGCTAGGCTCTTCTTGCAGCTCCATTTGTAGCTTCAAAGACGTTGTTCATGGCAACACACGGGTTGTTCACAGACCTGATAACTCCTCGCCGGAGAGTAGTGCTCTGGGTCAGCAAGCTGGGTTACTGAGTCGGAAGCCTCCCAGTAACACATCAACGGGATCAGCGAAAACCAACCCCGCACCAAACTACACGTCGTCTTCCAGGGGGATGCAATTCAGGAAACTCTCCGGCTGTTATGAATGTCGCATGATCGTTGACCCTTCCAGGCTCCCAATTCCGAGAAGCACTCTATGTTCTTGCCCTCACTGTGGAGACGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGTTACTCGTCATGCCGTTTCAGAGCTGGGCCCGGAGGACTCGGGTCGAAATATTGTGGAGATAATATTCAAATCAAGCTGGCTCAAGAAGGGTAGCCCCATCTGCAAGATCGAACGGATACTAAAGGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGTGCACAGCAAAGCACCAAGAAGAACCCCAGGTGCGCGGCGGATGGGAACGAGCTCTTGCGATTCCACTGCACGAGCCTTTCGTGCGCGTTGGGTGCACGTGAGTCGTCCAGCTTGTGCGGCACCGTGCCGGGGTGCGGCGTCTGCACCATAATCAGGCACGGATTTCAGGGCAAGTCAGGTGGTGGTTCTGACGGTGGCACTGAACAACACTATAAAGGAGTGCGGACCACGGCGAGCAGCGGTAGGGCCCACGACGCCTTGCAATGTAGTGATAGCAGAAGGGCGATGCTGGTGTGCCGCGTGATTGCCGGGAGGGTGAAGCGCGTGGCGGAAGAGACGCCGTCGGAGGAGGAGACTGTGTCGGCTGGGTCTTATGACTCGGTTGCGGGGTACGCCGGGATCTACTCGAATCTCGAGGAGCTGGTAGTGTTCAATCCGAAGGCTATCCTTCCTTGTTTCGTTGTGGTTTACAAAGTGGTTCCATGTTGA 1227 0.5477 MALLTFLPEQSDSDPKSQVSKRKRKQQKQKPLSSWDQIKNLLTCKQIQGSRVHDPSKNPTPLGYSKLGSSCSSICSFKDVVHGNTRVVHRPDNSSPESSALGQQAGLLSRKPPSNTSTGSAKTNPAPNYTSSSRGMQFRKLSGCYECRMIVDPSRLPIPRSTLCSCPHCGDVFPKMESLELHQVTRHAVSELGPEDSGRNIVEIIFKSSWLKKGSPICKIERILKVHNTQRTIQRFEECRDAVKSRAQQSTKKNPRCAADGNELLRFHCTSLSCALGARESSSLCGTVPGCGVCTIIRHGFQGKSGGGSDGGTEQHYKGVRTTASSGRAHDALQCSDSRRAMLVCRVIAGRVKRVAEETPSEEETVSAGSYDSVAGYAGIYSNLEELVVFNPKAILPCFVVVYKVVPC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2795 408 ProSitePatterns Zinc finger C2H2 type domain signature. 164 187 IPR013087 -
Dere05g2795 408 MobiDBLite consensus disorder prediction 1 34 - -
Dere05g2795 408 MobiDBLite consensus disorder prediction 86 134 - -
Dere05g2795 408 Gene3D - 188 406 - -
Dere05g2795 408 SUPERFAMILY ADP-ribosylation 189 404 - -
Dere05g2795 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 403 - -
Dere05g2795 408 MobiDBLite consensus disorder prediction 88 134 - -
Dere05g2795 408 FunFam C2H2-like zinc finger protein 188 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2795 Dere-ChrDere05 38642931 38645263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2795 1 406 C2H2 Transcription Factor Family AT1G75710 61.290 2.53e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere05g2795 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2795 05 38642931 38645263 Dere05g2795 05 38642931 38645263 ECH