Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2791 ATGGAAAATCAGCACCAACCCCTGAATTCGAGGTTCAAACGTATCTGTGTCTTCTGTGGTAGCAGTCCTGGAAAGAACCCCAGCTACCAGCTCGCTGCTATTCAACTCGCCAAACAACTGGTGGAAAGGAACATCGACTTGGTCTATGGAGGAGGAAGCATTGGGCTGATGGGTTTAATATCACAAGCCGTCTATGATGGTGGTCGCCACGTATTAGGAGTGATTCCCAAGACACTTATGCCAAGAGAGATAACCGGAGAGACGGTGGGAGAGGTGCGAGCCGTCTCCGGGATGCACCAACGCAAAGCCGAGATGGCTCGACAAGCCGACGCATTTATTGCATTGCCAGGTGGATACGGCACCCTCGAAGAACTATTAGAAGTCATCACCTGGGCTCAACTGGGAATCCATGATAAACCCGTAGGCTTGTTGAACGTAGATGGGTACTACAACTCGTTGCTGTCATTCATAGACAAAGCAGTGGAAGAAGGGTTCATAACACCCGCTGCCCGTCACATTATTGTGTCTGCCCAGACTGCCCAAGAGCTCATGTGCAAGCTTGAGGAATACACACCCAAGCACTCTGGGGTGGCTCCTAAGTTGAGTTGGGAGATGGAGCAACAGTTGGTTCACACTGCAAAGTCTGACATCTCGCGTTGA 660 0.5076 MENQHQPLNSRFKRICVFCGSSPGKNPSYQLAAIQLAKQLVERNIDLVYGGGSIGLMGLISQAVYDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFITPAARHIIVSAQTAQELMCKLEEYTPKHSGVAPKLSWEMEQQLVHTAKSDISR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2791 219 Pfam Possible lysine decarboxylase 57 186 IPR031100 -
Dere05g2791 219 NCBIfam Rossman fold protein, TIGR00730 family 13 190 IPR005269 GO:0009691|GO:0016787
Dere05g2791 219 Gene3D - 2 189 - -
Dere05g2791 219 FunFam CASP-like protein 3 189 - -
Dere05g2791 219 PANTHER LOG FAMILY PROTEIN YJL055W 5 209 - -
Dere05g2791 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2791 Dere-ChrDere05 38595723 38597483 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2791 05 38595723 38597483 Dere04g0098 04 965894 967686 CCT
Dere05g2791 05 38595723 38597483 Dere05g2791 05 38595723 38597483 ECH