Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2790 ATGGGGAAGGCCGAGCCCGAGGGCGTTATTCTGCAAAAGAGCTTTGATCAGTTGAGTCATGCAGCTACCGAGAAGAGAGTACAAGAACCGCCTCGTATGGAGCAACCCAAAAGCGAAAAAAGGATTCCTCATAAGGAGTTCCACGGTAAAACCAGTCAAAGGCAACATTGGAAATTGCGGGGATGCTACTTGTTAGTACCTTTTCTTGGGCTCTCTCCCTCCTATCCCACCACACCAACTCAGCACTCTAAATCCACAATGGCTCTGAAGAAACCCAACAGACTCCCTCAGACAGCAGTTCTAAAGCAAATTTTGAAGAGATGCTCGAGTTTAGGGAAGAAACAAGGGTACGATGAAGAAGGCCTGCCTTTGGACGTGCCCAAGGGTCACTTTGTTGTTTATGTTGGAGAAAACAGAAGCAGATACATTGTCCCAATCTCCTTTCTAAGTCGCCCTGAGTTCCAAAGCCTCCTCCATCAAGCCGAAGAAGAGTTTGGCTTCGATCACGACAGGGGTCTCACAATCCCCTGTGAAGAAGACGTTTTTGAGTCTCTCACCTCCAATCTCAGATGA 573 0.4782 MGKAEPEGVILQKSFDQLSHAATEKRVQEPPRMEQPKSEKRIPHKEFHGKTSQRQHWKLRGCYLLVPFLGLSPSYPTTPTQHSKSTMALKKPNRLPQTAVLKQILKRCSSLGKKQGYDEEGLPLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQSLLHQAEEEFGFDHDRGLTIPCEEDVFESLTSNLR 190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2790 190 MobiDBLite consensus disorder prediction 1 53 - -
Dere05g2790 190 Pfam Auxin responsive protein 118 187 IPR003676 GO:0009733
Dere05g2790 190 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 124 189 IPR003676 GO:0009733
Dere05g2790 190 MobiDBLite consensus disorder prediction 19 53 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere05g2790 Dere-ChrDere05 38580948 38584474 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2790 123 185 Calmodulin-binding Proteins AT3G43120 55.556 1.49e-18 77.0