Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2788 ATGCAGCTACATATGGTGAGCTGTACAGGATACAATGCCAGTGACGGTGTGGTCCAGTATACTACCATTGCAGCAGCTGCTACAGCAGCATTATCAGAGTTTTTCTCTTCGCTCCCATTTTTTCTGATGGACCGGCGCTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGCTCGAGAAAGCAGCTGCTGCATTGGATTCTGTTAGTGCTTCCTCTCAGGGCAATCAGGATGGTTACAAAAAGCCAAAGTATGTTCAAATTTCTGTGGAGTCATATTCACATCTCACGGGTTTGGAGGATCAAGTGAAAACGTATGAGGAAAAAGTTCAGACTCTGGAGGATGAGATCAAGGAACTGAATGATAAGCTGTCAGCAGCAAATTCGGAGATGACTACCAAGGAAAACCTTGTAAAACAACATGCAAAAGTTGCTGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGTCATTGAAGAATCATCTGGAATCTGTCACTCTTGCTAAACTCACTGCTGAGGATCGTGCATCTCATTTAGATGGTGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAAGAAGAACATGAACAGAAAATGCAAGAAGTTACTCTCTCTAAAACCAAGCAATTGGACAAGATTAAGGGAGAGCTTGAGGCAAAAATTGATAACTTAGAACAGGAACTCCTTAGGTCAGCTGCAGAAAATGGAGCGCTTTCAAGATCCTTGCAGGAACGTTCTAACATGCTAATAAAAATAAGCGAAGAAAAAACTCAAGCTGAGGTGGACATTGAGCTTCTGAAGAGCAACATTGAATCATGCGAAAGAGAAATTAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCCGCTAACAAGCAGCATATGGAGGGTGTAAAAAAAATTGCCAAGTTAGAGGCAGAGTGCCAAAGATTGCGTGGCCTGGTGCGGAAAAAGCTACCAGGTCCTGCAGCTCTTGCACAGATGAAGCTAGAAGTTGAGAACCTTGGTAGAGATTATGGAGAAAGTCGACTAAGGAAGTCTCCTGTCAGGCCTGCTAGTCCTCATCTGTCTCCTTTGCCTGAGTTCTCCTTAGAGAATGTACAGAAGTTCCAAAAAGAGAATGAATTTCTTACAGAGCGTTTATTGGTAATGGAAGAAGAAACCAAGATGCTCAAGGAGGCTTTGGCTAAACGTAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCAAAAACCCTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAAACCTGTAACCAGCATAAAGGATCTCCAAAATCCATCATCCGGATGACCCATGAAAGTATTTACAGTCAAAATGCAAGCTATGCACCAAGCATAACCTCCATGTCTGAAGATGGACATGATGATGCCGTAAGTTGTGCTGAGTCTTGGGCTACGGCATTAATCTCTGAACTTTCCCAATTTCGAAAGGAAAAGAGTACCGAAAAATCAAGCAAACCTGAAGCAACAAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTAGAGAAATTGGCTCGTCTATCTAACAATTCCAGTGGAGATGCCTCTGTTTCAGTTTATTTGAACAACAAGACATCTGACATTGTGACCAATGATGTATCAAATGATAGTAGTGGCAAAGATGATTCTTCTGAGAAACAGATTGTTTCAAATCCATTGCCAGATCAGCTGTCTTCAGTTGCAGGGTTGTCAGCACCTGATCCTGGATCTGATGTTGATGGCTTTTCATTGACAGAGCTTCGATCGAGAATATTGTTGGTTTTTGAGTCCATGTCTAAGGATGCTGATACAGGAAAGGTCCTTGAAGATATTAAACATATTCTAGAAAATGTACACAACACTTCTGTCCAGTACTCCTCTGGTTGCATTTCTCAGGATGTCCAGGAACTCCAGCCTTCGGATTCTCCACGTGATAGGCTGGCTAATCCTGAAGATGCTGGGTTAAGTGTTGAAAAGGATGCTACTTCATCCCAGCAAGCAACAGAATATGTTCAGGTAAATCCAAATATAGAAGCTGCAGTTTCTCAGATTCATGACTTTGTATTGTTCCTTGGTAGAGAAGCAATGGCAGTTCATGACATCTCTTCTAACGGTCTTGGAATGAGCCAAAAGATTGAGGAGTTTTCTGTCACTTTTAATAAAGTTCTCTGCGACGAAGCAAGTGTGTTAGAGTTTGTTCTTGACTTGTCTAGTGTTTTAGTTAAAGTTGGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGTTGAAACTAACAGTCCTGATTGCATAGACAAGATTGCTTTGCCAGAAAATAAGTTAGTTCAAGATTGTTCACCAGGAGAGAGATATCAAAATGGTTGTTCTCATATTCTTAATCCTTGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGGTCTCTGGCTATAAACCAAATGCTACAACCGAAAAATTCACGGTGGAGGAGTTTGAAGAGTTGAAAGTAGAGAAAGAGAAGGCTGCAATGGATCTGTCAAGATGCACTGAAAATCTTGAAATGACAAAGTCTCAATTACAGGAAACTGAGCAACTTCTGGCGGAAGTTAAATCACAATTGGCATCTGCTCAAAAATCTAATAGCTTGGCTGAGACACAGTTGAAATGCATGGCAGAGTCATACAGGTCACTTGAAACACGTGCACATGAGTTGGAAACTGAGCTGAATCTTCTGAGAGTTAAGACTGAAACTCTGGAGAATGAACTTCATGATGAAAAGAAAGGTCATGAAGATGCTTTGGCCAAGTGTGAGGAGCTAGAAGAGCAATTACAAAGGAATGTGAATTCAGCAGCTGATAACGACCTTAAGACCAAGCAGGAGAGAGATTTGGCAGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATCTATATTCTTGGTAAGCAGTTGAAAGCCCTGCATCCTCAAGCAGAGCAAAATGGTTCTCTGTACAGTGAAAGAAGTCCAAAGGCTGAAGGCTTCGCGGAGGACGAACCTACAACTAGTAGCCCAAATTTGCAAGAATTAGAGCAGGCTGATATGGACAATGCTACTTCTGCTTATCTGCGGAAACTGGGTGGGGGGTCGCCCTTGCATTTTTCCAACGTTGTATGTAGTTCATCTGATAATGAAGCAAACCTTCCTGACAGATCTCCGGTAAAGCCTCCAAAACACAGCTCTACCAAGTCAACCTCTTCATCAGCCTCCTCGACTCCTACACCAGAGAAACATGCACGAGGCTTTAGTAGATTCTTTTCATCGAAAGGAAAGAATGGTCACTGA 3390 0.4212 MQLHMVSCTGYNASDGVVQYTTIAAAATAALSEFFSSLPFFLMDRRWPWKKKSSDKAVLEKAAAALDSVSASSQGNQDGYKKPKYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELNDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHEQKMQEVTLSKTKQLDKIKGELEAKIDNLEQELLRSAAENGALSRSLQERSNMLIKISEEKTQAEVDIELLKSNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVRPASPHLSPLPEFSLENVQKFQKENEFLTERLLVMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQTCNQHKGSPKSIIRMTHESIYSQNASYAPSITSMSEDGHDDAVSCAESWATALISELSQFRKEKSTEKSSKPEATNKLELMDDFLEVEKLARLSNNSSGDASVSVYLNNKTSDIVTNDVSNDSSGKDDSSEKQIVSNPLPDQLSSVAGLSAPDPGSDVDGFSLTELRSRILLVFESMSKDADTGKVLEDIKHILENVHNTSVQYSSGCISQDVQELQPSDSPRDRLANPEDAGLSVEKDATSSQQATEYVQVNPNIEAAVSQIHDFVLFLGREAMAVHDISSNGLGMSQKIEEFSVTFNKVLCDEASVLEFVLDLSSVLVKVGEFRFNVLGYKGTEVETNSPDCIDKIALPENKLVQDCSPGERYQNGCSHILNPCSDPEVPDDGNLVSGYKPNATTEKFTVEEFEELKVEKEKAAMDLSRCTENLEMTKSQLQETEQLLAEVKSQLASAQKSNSLAETQLKCMAESYRSLETRAHELETELNLLRVKTETLENELHDEKKGHEDALAKCEELEEQLQRNVNSAADNDLKTKQERDLAAAAEKLAECQETIYILGKQLKALHPQAEQNGSLYSERSPKAEGFAEDEPTTSSPNLQELEQADMDNATSAYLRKLGGGSPLHFSNVVCSSSDNEANLPDRSPVKPPKHSSTKSTSSSASSTPTPEKHARGFSRFFSSKGKNGH 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2788 1129 Coils Coil 391 411 - -
Dere05g2788 1129 Coils Coil 978 998 - -
Dere05g2788 1129 Coils Coil 867 975 - -
Dere05g2788 1129 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 43 1124 - -
Dere05g2788 1129 Coils Coil 180 240 - -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 658 691 - -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 562 607 - -
Dere05g2788 1129 Coils Coil 255 331 - -
Dere05g2788 1129 Pfam Filament-like plant protein, long coiled-coil 134 1015 IPR008587 -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 1016 1042 - -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 1093 1112 - -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 578 592 - -
Dere05g2788 1129 MobiDBLite consensus disorder prediction 1075 1129 - -
Dere05g2788 1129 Coils Coil 96 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2788 Dere-ChrDere05 38563624 38569996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2788 05 38563624 38569996 Dere04g0103 04 1019184 1025260 CCT
Dere05g2788 05 38563624 38569996 Dere05g2788 05 38563624 38569996 ECH