Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2782 ATGCGTGGTTTACACAAATCCAAAAGAGTTTCATGGGCATCAGATTTAGATCTTTGTCAGATTTATCAACTGTATAACGGTTTCCATGGTGTATTGGCTTTTTTGATGACACAATCCTGTTGGCATGATGTAATGTACAGAGACTATTCAACTCATTTTGGCTATAGTTTAGAACTTTTAGCCTGCAGCAACGTTGAATTTGTTCTTTTTCTGTTTGAAAGGAGACTAAGCACAAGATCTCAGCCACTTCCAACATGGGAGGGCCAAGTCATAGTGATAAATTGTGGAGACCTACTGCTGGTGAATGCAAAAGTATTGGAAGAAAAGGTTAGATTATTTTTATCAGAGGAATGTCCTTCACAAGTTGGGTCAAATTTTCAAGATCACCTCCAAGCAAAGACATCGTTACTGTTGCATCCAGGTGGAGCAGGTTCTGATGACATTCTACCTCCTGGCTTTGAGGGAACTCAACCTTCAAGTCAGATGCAGATTAAGCTGTCCCAAATTCCAGTTATTAGATGGACTAGGCCACTAAAGATTGTGCTGAATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAAACTCAGAGGGAGATGAAAGTACTAGAAGCTATTTATCCTCGCCCATCTTCCATTCCTCCAAACCCCTCTGTTTCAATGGATGTAGAAGACTCCCATTTCAGTGATGATCAAACTGCTTTGATACCAATTACTCCCATCGAAGATGAAGATGCAGCAGTAGAAGCATCATCGGAAGTTCTACTTACTTCACAACCTTTTTTATTTTCCAACTCTTCTTCAAGTACGCAATTACCTCGTGCAGTAGAATCTGATGTAGCTGCTGCTGCATCTGTAGCTTTAGCCAATATCATGGAGAGCAACGAACATGGAAATTTGATTGACCATGAATTGCTAAATAAAATTCTCAGCAACCCAGAAGTCATTGAGAAGTTGTTTAGAGATTATGGAAATACAAATAACTCGCAACATTCATTCAATGCTAGGCCATCCCCAGTGGCTCTTTCACAACCACCTATTACAGTGAATCAAACTGAAACCAGTACACCTTCATTAGGTGCTTTTTCAGCCAGCCCTTCCTATCCTCTCTCGAGTGGTGGTCGAGTGGGACCTGTTTCTCCTCAACGAGTTCCTCCTCCTGCAGTGAGTCCGGTTAGTGTTGGTGCTCCTCCAGCAAAGGATGTGAACTACTATAAAAGTTTAATTCAGCAACACGGTGGAGAAAGACAAGAGGCTCTTCCTTACTTGGGCAACATTCAGCAGCCAGTACGAAATCAGGAGACAGCCCAGAATTCTAGATTCAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATATATTTTAACAGTTCAAAAGGATGTAGGAATGGTGTTGACTGTGCCTACCAGCATGATGCAACATGCCAGCCACGGAGTAGTGCTGTGCCTAGCATGCAAAGTTCAAAGAGAACCAAAATGGATAGCGAGATTAGCAGTTCGTTAGACTCTTAA 1527 0.4217 MRGLHKSKRVSWASDLDLCQIYQLYNGFHGVLAFLMTQSCWHDVMYRDYSTHFGYSLELLACSNVEFVLFLFERRLSTRSQPLPTWEGQVIVINCGDLLLVNAKVLEEKVRLFLSEECPSQVGSNFQDHLQAKTSLLLHPGGAGSDDILPPGFEGTQPSSQMQIKLSQIPVIRWTRPLKIVLNLTWQVVAGEESKEVEDQTQREMKVLEAIYPRPSSIPPNPSVSMDVEDSHFSDDQTALIPITPIEDEDAAVEASSEVLLTSQPFLFSNSSSSTQLPRAVESDVAAAASVALANIMESNEHGNLIDHELLNKILSNPEVIEKLFRDYGNTNNSQHSFNARPSPVALSQPPITVNQTETSTPSLGAFSASPSYPLSSGGRVGPVSPQRVPPPAVSPVSVGAPPAKDVNYYKSLIQQHGGERQEALPYLGNIQQPVRNQETAQNSRFREPKPKIMKPCIYFNSSKGCRNGVDCAYQHDATCQPRSSAVPSMQSSKRTKMDSEISSSLDS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2782 508 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 345 499 - -
Dere05g2782 508 ProSiteProfiles Zinc finger C3H1-type profile. 451 479 IPR000571 GO:0046872
Dere05g2782 508 MobiDBLite consensus disorder prediction 479 508 - -
Dere05g2782 508 MobiDBLite consensus disorder prediction 377 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2782 Dere-ChrDere05 38509133 38514447 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere05g2782 None None None