Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2781 ATGAAACTGTTGGGAGTACGTGTTGGTCAAAATGAGCCACATGACACCGGCTTGGGTTTGGTTTGTTACACTTACCATTTCCAATGCGGTGACCGGACGGGTCTTGACTCCCACGAAAAGAGAGTGCGAAGTGTCAAGGCTGAGGAACAAACTGCGAAGGAGAGAGACATGGGAAAATCAGCTTCCTGCTTCAAATTAATAATATGCGGCAGTGATGAGGCGGACAGCAACGACGATTACCAAGTGTCTGAGATCAAGGATTCTAATGACAAACGTGGTTGGAGTTTCCGAAAGAAATCTGCTAGGCATCGTGTGCTTAGCAATACTGTAATTACAGATACTCCATCTTCTGCAAATAAGGAGAGTTCAGAGTGTACTAGTATTAATTTCCAACCACCAGTTGACCCTAATGTTGCTGAGAAGAGCCACAAAACAAATTACTCTGATGAGAAACCCCAACAATTATCATTGGAAAACTCACAATTATCTGAAACAGTTGTCACTGAAACTGAGAGTAAGTTGGACATCAATCCACCGGAGTCTGTTGTTATCACCATCCAGGCTGTCATCAGAGGGTTCATGGCTCGGAGAGCCCTGCTAAAGCTTAGGAACGTAGTGAAGTTGCAAGCTGCTGTTCGCGGGCACTTGGTTCGAAGGCATGCTGTAGGTACTTTGCGTTGTGTTCAAGCCATAGTTAAAATGCAACTCCTTGTGCGAGCTCGTCGTGCTCAGCAGTTACATCAAGATAAGCATGGCAAAAATAATGGATCAGAAATTTTGGGTAATGGAAATCAGTTGACCAAGGCAAGTGTGAAGTACTCCTCTATAGAGAAGCTGCTTAGCAATAGGTTTGCTCATCAGCTGTTGAAATCCACACCAAAAAACAAACCAATCGATGTCAAATGTGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTCTCCACGTTGGATTCTGCAGAGTCTGCAAAAGCAAGTTCAATGGTGGAACAATCAAATGACAATGAATACAGCACTTCTGTGTCTCAATTGGAAACAGGTGTTCAGTCTGAAGCTTTTTCTCAGCCAGCTGACCCAAAGCTCACTGTTGAGGAATCTGTTGTACCTTTGGAGGATGACGAGAAGGTTACTACTCTTGATACTGAAAAGTTAAACGTTGAAGCAAACCATTCTACATCTTCTCTTGTAAAAGATGACTTGGAACAGGCTCTCCCTGAAATGACAATTACGTCTGATGCTAAAGTAACCTCAGGAGAAATCGATTCTCACCAAGATAAAATTGTGGCATCAGACGCAAGTGCTCCACAAGAGCTTAATTCTCTTCCTCAGAAGCCTGAAATTGATAGTGAACAACCTAAACGATCTATGAAGAGATTTGCCACTGACCAACTAGAGACTGAGGGATCCAAATTTGGGTATGGATCAAGAAAGGCCAGTAATCCAACATTTATTGCTGCACAGTCAAAATTTGAGGAGCTGAGTTCAATGGTAAATTTAGGCTGGTCAAGCAGTTTGTCCTATCAAGATGCAGCAGTTGAAGCACCAGTGGACGGCGGTTCTGTTGTCACGGACACTGCATTTAGGCCGAAAGAGCTCTTAGCAGAGAATACTACTACGTATCCTTCCAGAATTGGTGGCTCTGAATGTGGTACTGAGCTCTCTATTACTTCCACTCTTGATTCACCTGATGTATCTGAAGTTGGGGCTATAGAAAATGAATGTGAAACCAAAGATTTAGCTGAAGGGATTTGTAATCCCGACAACATGATAAATCATGAGGCTGAGGCCAACGTTTTATATACCACTCCAGTTTGTGACTTACCGAGCTCTGGTCTAGATCAGCCAGAGACTGCCAATGATGATGACATCAATGGCAAAACAGTCCATTCTGCAGAAGCTGTTGATTCCAAAGAGCCAGCTCTTAAGTCTAAGAAAAATGTGTCTGATTTGCGCAGAGAACAGGTAGAATCTGTTGTGCAAGGTGTCCAAGCATCCCCGGAAGCTTCACCTCGTAGCCATATGACTGTCCCTGAATCACAAGGAACACCTTTGAGTCAGGTGTCAGTGAAACCTAACGAGAGCAAAACTGACAAAACTGGATCCTCCAATAGACGAAGGTTGCTGGCTGCTGGTAAGAAATCACCTGCAAATGCAACTCCTGATTCAGGATCTAGCGGTAGTAGGGAACAACTACCTAAAGATCAGCAGAGTGGAAAGAGACGCAATTCCTTTGGCTTAGCAAAACCTGATCCCATTGATCAAGAATCAAGAGATAACAGTAGTAACAATAGTTCTCTTCCTCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGATTAACGCAAATAATTCTCCAAGATCAAGTCCAGATGTGAATGACCGAGAGATACACGTCAAGAAGAGGCACTCCTTACCGGGTGCAAGTGCAACTGGTAGACAGGGTTCACCACGCATCCAGCGATCAATGTCTCAAGCGCAGCAGGGCACAAAAGGAAACAGTGTACATCCTCATGAGAGGAAGTGGCAGAGGTGA 2553 0.4403 MKLLGVRVGQNEPHDTGLGLVCYTYHFQCGDRTGLDSHEKRVRSVKAEEQTAKERDMGKSASCFKLIICGSDEADSNDDYQVSEIKDSNDKRGWSFRKKSARHRVLSNTVITDTPSSANKESSECTSINFQPPVDPNVAEKSHKTNYSDEKPQQLSLENSQLSETVVTETESKLDINPPESVVITIQAVIRGFMARRALLKLRNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQLLVRARRAQQLHQDKHGKNNGSEILGNGNQLTKASVKYSSIEKLLSNRFAHQLLKSTPKNKPIDVKCDPSKADSAWKWLERWMSVSTLDSAESAKASSMVEQSNDNEYSTSVSQLETGVQSEAFSQPADPKLTVEESVVPLEDDEKVTTLDTEKLNVEANHSTSSLVKDDLEQALPEMTITSDAKVTSGEIDSHQDKIVASDASAPQELNSLPQKPEIDSEQPKRSMKRFATDQLETEGSKFGYGSRKASNPTFIAAQSKFEELSSMVNLGWSSSLSYQDAAVEAPVDGGSVVTDTAFRPKELLAENTTTYPSRIGGSECGTELSITSTLDSPDVSEVGAIENECETKDLAEGICNPDNMINHEAEANVLYTTPVCDLPSSGLDQPETANDDDINGKTVHSAEAVDSKEPALKSKKNVSDLRREQVESVVQGVQASPEASPRSHMTVPESQGTPLSQVSVKPNESKTDKTGSSNRRRLLAAGKKSPANATPDSGSSGSREQLPKDQQSGKRRNSFGLAKPDPIDQESRDNSSNNSSLPHFMQATESARAKINANNSPRSSPDVNDREIHVKKRHSLPGASATGRQGSPRIQRSMSQAQQGTKGNSVHPHERKWQR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2781 850 MobiDBLite consensus disorder prediction 723 748 - -
Dere05g2781 850 SMART iq_5 201 222 IPR000048 GO:0005515
Dere05g2781 850 SMART iq_5 178 200 IPR000048 GO:0005515
Dere05g2781 850 MobiDBLite consensus disorder prediction 664 702 - -
Dere05g2781 850 MobiDBLite consensus disorder prediction 762 796 - -
Dere05g2781 850 MobiDBLite consensus disorder prediction 437 462 - -
Dere05g2781 850 PANTHER IQ-DOMAIN 5-RELATED 619 819 - -
Dere05g2781 850 Pfam IQ calmodulin-binding motif 203 220 IPR000048 GO:0005515
Dere05g2781 850 Pfam IQ calmodulin-binding motif 183 199 IPR000048 GO:0005515
Dere05g2781 850 MobiDBLite consensus disorder prediction 815 839 - -
Dere05g2781 850 ProSiteProfiles IQ motif profile. 201 230 IPR000048 GO:0005515
Dere05g2781 850 Gene3D - 179 227 - -
Dere05g2781 850 Pfam Protein of unknown function (DUF4005) 755 833 IPR025064 -
Dere05g2781 850 MobiDBLite consensus disorder prediction 110 133 - -
Dere05g2781 850 Coils Coil 35 55 - -
Dere05g2781 850 MobiDBLite consensus disorder prediction 637 658 - -
Dere05g2781 850 MobiDBLite consensus disorder prediction 637 850 - -
Dere05g2781 850 MobiDBLite consensus disorder prediction 110 162 - -
Dere05g2781 850 ProSiteProfiles IQ motif profile. 180 207 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2781 166 850 IQD Protein Family AT1G19870 37.765 1.88e-105 336