Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2779 ATGAATAGTTTCGATTATAATCCAGTTAAGTCAATGGAAGGTAATCAAGGTATTCACCCAGCTAGTCCTGGTATTGCTGTACAACGAGTTAGTTCTGCATTTGGTTCCTCCTCAGGAGCAGCTCCTAGACCACAAAACCGATTCAATGCTCCCAATCCCAATTTCAATGCCTCTCAAATGGGTGCTTCTGCGCTTATGTTGCAGCATAATATGAGTTCTGAGAACCTGAAACCTGGCATACCTCCATCCCACCCTAATGTCCCAACTTCTGCGCCTTATCCCCACATTGTAGAGTCCCAATCAGCTTCCCAGCAACTACGTTCTCCGAATATGAGACCGCGTTCTTCCCATTCGAGGTCTTTGTCTCAACAGTCCTTTTTCTCGCTGGATTGCTTGCCCCCATTGAGTCCTTCGCTTTATTGTGATCCCTCAGCGACCCCTCTCTCTAACTCGATTTCCACAGATGTGTCTATGGAAGAAAGCGCGGTTAACTCTCATGCCCCGTCCATTTCTGTGCCCATCAATAGGGATCATGCATTTCAGGCTGGTCATAGCGTTCTTCCTCGTAAAGGACACAGGCGCTCAAGCAGTGATACTCCATTAGGAATCTCTGGCTTTAGTCAGTTTTCTCCTCCGTTGGTTCCCTCTACTACTTGGATGAATCTGGACAATCCTATTTCTAGAGGAAATAGCTCAGGTTTCGAGAAGCCAATTCAGTTGGTGAAAAAGGATCCAAAGAAGGATGAAGGTCATGTTGATTGCTACAATGCAAAACCTATAATTGAGAGGAAAGAGGATGTGATGGATGATTTAATTAGTGTGTTTATGAATTTGGATAACATTGATAATTTTAACTTATCTGGAGCGGAAGAATCAAAGACTCTTGAGAGCAGTGATAATGAAGTTGAGAGTCATGTAATTGGAAAAACTGCCTCTACACAGGGGGCAACTTCAAGCTTTGTGGAAGAAAGGAGGGAAGGAATAAAGAGGAGTTCTAATGGGGACATTGCACCAGGTTCCCGACATCGAAGAAGTTTCTCCTTGGATAGTTCTATAGGAAATTTACATATTGAAGATGAATCACTAAAGCTTCCTCCATTGGGGAATGGGGTTGGTCAGTGGTCACCTAGCCATTCAATAGAGGGTAAAACATCTGAAATCGACATGGACTTCAGAAATGGTGAATTCAGTGAACTGGAGCTAAAAAAAATAATGGAAAATGATAAGCTTGCTGAGATTGCTCTGTCAGATCCCAAGCGTGCAAAAAGAATATTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGCGTAAGGTGCGGTACATTGCTGAACTAGAGCACAAGGTGCAAACTCTTCAGACAGAGACAACCACAATGTCTACTCAATTTACCAAATTACAGAGAGATAATTCAGAGCTTAAAAGTGAGAACAATGAGCTGAAATTTAGGCTTCAAGCAATGGAACAACAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTGTCTGCGGAAGTCCAGCGATTAAGGCTCACAGTCACGGAACTTGGTGGAGAGTCCATTCTCTCGGGTTGCATGGCTCGCCAGCGTGCTATGAACCTACAAAGTTTCCAATTGCAACATGAGCAGCCTGGTCAGTCTAAACAATCCCAAATGCAAAATCATCCTCAGAATGGGACCCAGACTCAGTCACACCAGATTCAACATAATGAATTGCATCTCCAACCGCAGAATGACAAAGCTACTGCCTACTAA 1752 0.4378 MNSFDYNPVKSMEGNQGIHPASPGIAVQRVSSAFGSSSGAAPRPQNRFNAPNPNFNASQMGASALMLQHNMSSENLKPGIPPSHPNVPTSAPYPHIVESQSASQQLRSPNMRPRSSHSRSLSQQSFFSLDCLPPLSPSLYCDPSATPLSNSISTDVSMEESAVNSHAPSISVPINRDHAFQAGHSVLPRKGHRRSSSDTPLGISGFSQFSPPLVPSTTWMNLDNPISRGNSSGFEKPIQLVKKDPKKDEGHVDCYNAKPIIERKEDVMDDLISVFMNLDNIDNFNLSGAEESKTLESSDNEVESHVIGKTASTQGATSSFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIEDESLKLPPLGNGVGQWSPSHSIEGKTSEIDMDFRNGEFSELELKKIMENDKLAEIALSDPKRAKRILANRQSAARSKERKVRYIAELEHKVQTLQTETTTMSTQFTKLQRDNSELKSENNELKFRLQAMEQQSQLKDALNETLSAEVQRLRLTVTELGGESILSGCMARQRAMNLQSFQLQHEQPGQSKQSQMQNHPQNGTQTQSHQIQHNELHLQPQNDKATAY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2779 583 Coils Coil 435 455 - -
Dere05g2779 583 SUPERFAMILY Leucine zipper domain 419 475 IPR046347 GO:0003700|GO:0006355
Dere05g2779 583 FunFam probable transcription factor PosF21 418 471 - -
Dere05g2779 583 CDD bZIP_plant_RF2 420 470 IPR044759 GO:0003700|GO:0006355
Dere05g2779 583 SMART brlzneu 415 479 IPR004827 GO:0003700|GO:0006355
Dere05g2779 583 MobiDBLite consensus disorder prediction 1 56 - -
Dere05g2779 583 MobiDBLite consensus disorder prediction 304 320 - -
Dere05g2779 583 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 417 480 IPR004827 GO:0003700|GO:0006355
Dere05g2779 583 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 107 567 - -
Dere05g2779 583 MobiDBLite consensus disorder prediction 73 120 - -
Dere05g2779 583 MobiDBLite consensus disorder prediction 292 343 - -
Dere05g2779 583 Gene3D - 418 495 - -
Dere05g2779 583 Pfam bZIP transcription factor 419 477 IPR004827 GO:0003700|GO:0006355
Dere05g2779 583 MobiDBLite consensus disorder prediction 537 583 - -
Dere05g2779 583 Coils Coil 463 490 - -
Dere05g2779 583 MobiDBLite consensus disorder prediction 29 56 - -
Dere05g2779 583 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2779 Dere-ChrDere05 38470230 38472998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2779 27 514 bZIP Transcription Factor Family AT4G38900 44.402 1.16e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g2779 bZIP_1 4e-10 CL0018