Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2776 ATGACTTCACTTCCTCTTTTTCCTTTACTCTTCTCATACATTCTCCTCCTCACAGTGCCCTCTCCGACCGAAGCCGGCGGTGGCCAGTGGCAACTTCTGCAGAATAGCATCGGCATTGTGGCCATGCACATGCAGTTATTGCACAACGACCGCGTCGTCATCTTCGACCGTACCGACTTTGGCTTATCCAACTTATCCTTGCCTCATGGCAAATGCCGCCGCAATCCAAACGAGTTAGTTGTCAAGGTAGACTGCACTGCTCACTCCCTCGAGTACGACGTCGCTTCCAATACTTTCCGCCCACTATTCGTCCAGACTGATGTCTGGTGCTCCTCCGCCTCCGTCACCCCCGACGGCCGCCTCGTCCAGACCGGTGGCTTCAACGACGGAGACCGTGCCGTCAGGATATTCAATCCTTGCCCCACCTGTGACTGGCAGGAAAAAAATGCGGGACTCGCAGCTCGTAGATGGTACGCTACCAATCACATTCTGCCAGACGGACGCCAGATTATCATCGGCGGCAGGAGACAATTTAACTACGAATTTTACCCCAAAACACAAGCAGCTAAAAACACTTACAGTTTACCCTTTCTAGTACAGACCAACGATCGCCGTGCTGAGAACAACTTGTACCCTTTTGCTTTTCTGAACGTAGACGGCAATTTGTTTATCTTCGCCAACAATCGAGCTATCTTGTTCGATTACAATAAGAACCAAGTGGTGAGAACATACCCACAAATACCAGGTGGAGATCCGAGGTGTTATCCCAGCACAGGTTCAGCGGTCTTGCTACCTCTGAGGAATTTGCAAAAGGCGTCTATTGAAGCGGAGGTTTTAATTTGTGGTGGAGCTCCGAGAGGGTCCTTCCAGCAGGCTAACGTAGGCAAGTTTCTCGGAGCCTTGAATACCTGCGCTCGGATCAAAATAACTGACCCTAACCCGCAGTGGGTCATGGAGACCATGCCTGGGGCCAGAGTCATGAGTGACATGATCATGCTTCCAAACGGCAACGTTTTGATCATCAACGGTGCAGCTTTGGGCACGGCCGGATGGGAATGCGGGCGGAACCCGGTGTTGAGCCCGTTCATTTACAAACCGGATAGACGGGTCGGGTCCCGTTTTGAATTGCAAAACCCGTCCTCTATTCCCCGGGTGTACCACTCCACTGCAGTTTTGCTTCGAGATGGTCGGGTGCTTGTGGGTGGAAGCAATCCTCACACGTACTACAATTTCACCAATGTCATATTCCCAACGGAGCTAAGGTTAGAGGCGTATTCGCCTTCGTACTTGGAGGCTGAATTTTCAGACGTGCGTCCCAAGATTTTATTGCCTGCTTCTCAGACTCAGGTTAAATATGGTCAGAAGTTGGTGGTGCGATTCCAGGTGACAGCAACGTTTGCTCAAAACTTGGTGTCGGTGACGATGTTGGCGCCACCTTTTAACACGCACTCATTCTCCATGAACCAGAGGCTGTTGGTGTTGGAGCCAACCAAAGTATCCGATTTGGGGAAATTGACGTACGAAGTTGAGGTCACCTCACCCGGTTCGCCGATCCTGGCACCACCCGGTTTCTATCTACTATTTGTGGTTCATCAAGAAATTCCCAGCGAGGGTATTTGGGTCCAAATACTGTGA 1635 0.5101 MTSLPLFPLLFSYILLLTVPSPTEAGGGQWQLLQNSIGIVAMHMQLLHNDRVVIFDRTDFGLSNLSLPHGKCRRNPNELVVKVDCTAHSLEYDVASNTFRPLFVQTDVWCSSASVTPDGRLVQTGGFNDGDRAVRIFNPCPTCDWQEKNAGLAARRWYATNHILPDGRQIIIGGRRQFNYEFYPKTQAAKNTYSLPFLVQTNDRRAENNLYPFAFLNVDGNLFIFANNRAILFDYNKNQVVRTYPQIPGGDPRCYPSTGSAVLLPLRNLQKASIEAEVLICGGAPRGSFQQANVGKFLGALNTCARIKITDPNPQWVMETMPGARVMSDMIMLPNGNVLIINGAALGTAGWECGRNPVLSPFIYKPDRRVGSRFELQNPSSIPRVYHSTAVLLRDGRVLVGGSNPHTYYNFTNVIFPTELRLEAYSPSYLEAEFSDVRPKILLPASQTQVKYGQKLVVRFQVTATFAQNLVSVTMLAPPFNTHSFSMNQRLLVLEPTKVSDLGKLTYEVEVTSPGSPILAPPGFYLLFVVHQEIPSEGIWVQIL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2776 544 PANTHER SECRETED PROTEIN-RELATED 20 543 - -
Dere05g2776 544 Pfam Galactose oxidase-like, Early set domain 438 543 IPR015202 -
Dere05g2776 544 CDD E_set_GO_C 434 543 IPR015202 -
Dere05g2776 544 Gene3D - 24 435 IPR037293 -
Dere05g2776 544 SUPERFAMILY Galactose oxidase, central domain 91 431 IPR011043 -
Dere05g2776 544 Pfam Glyoxal oxidase N-terminus 42 283 IPR009880 -
Dere05g2776 544 FunFam Aldehyde oxidase GLOX 24 436 - -
Dere05g2776 544 SUPERFAMILY E set domains 434 543 IPR014756 -
Dere05g2776 544 Gene3D Immunoglobulins 437 544 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2776 Dere-ChrDere05 38450179 38451813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0115 04 1205978 1207609 Dere05g2776 05 38450179 38451813 CCT
Dere05g2776 05 38450179 38451813 Dere05g2776 05 38450179 38451813 ECH