LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g2773	ATGGATGGCGAAGTGAAGGGGTCTGGGACCAAAAAAAGATCGAAACAGGTGGAAATTGGTATTGATTCGGATGATGACGAGCCCATTGGGTCTATATTTAAGCTGAGGAGGCCTCGTAACTCCAGGAGCGTGAGCTTGGCAATAGAGGGCACTGGTGATAGGGTCGAGAATGCTGAGGCTGTCGGGAAGAAATTGGTTGCTGCAGAAGAGGATTCAGGGGGTATGGATGATACCTTAGCTAGCTTTCGGAAGAGGTTGAAGGGTCCAAAGAGAGATCAGGGATCTGGAACCATCAGAGGAGGAAATTCTGCTTTGAATGTGTTAGCTGATAGTTCTTTGGATGTTCCATCTGCAGGCGGGGTTCTGGATAATGTCAAGGAAGGACAGGTTGTGGGTGATAGTGGATCTGATACTATGGTTATAGAAGTAGCAGGCAGCAATCAAGGAAAAATAGGGAGACCTCACATGGATCTGGCACAGAAGGGTAGTGAAGATCATGCTACATTTGATGATGATTTGGTAGCTCAGGGATCTAGCAGTACATTGAAGGATGAGAAAAAGGTGGTTTTATTGCCTTGTGATAATTTGCAACACTCTTCTGATGAACAGAAGGAAGACTTATTGTCAGTGATTTTCCAAAATGCACAATCTAATTTATGCAGAAAATCTCGTACTTCTTCAAGTTCAAAGCAGAAAACTGGGAATCAGATTGTGGATGACGGGTTGAGCCCTGATTTGAAAAGTATTCCAGAAACTGTAGAGTCTATGGCTGAGTGTAAATCTAAATTTGCTTCAGCTTCAAAATTGGATAGTAGAATTTTGAAATCTGCTAATGATTTTCCTGAAGGATCTGATTCACATTCATCTGCTTCAGCATCTGTAATGGATAATAAACTGTTTGATGGTGGCTGTCTTCAAGAGGAAATTTCCAAGGGTACTTCTTATTCAAACATAAAAAATGGTCTGGCTGTTGATCAGTTTTCCTTGACCGATGTCTGCAATGAAGATAGCCAACAATTTTCTTCTGTTCAACTTGGGGATGTTTGCTCTCCTTCCCATCAAAAGGTTACATTTCAAGAAAGAATTGACAGTGATGGTTTGAAGCAATGTTCTGTCATGTTACATGGTGTTGAAAAAATGGCTGACACTGCCTCACACTCAGAAGTGGGGGAAGGGTTATGTGGCCTTGGTGAGGGTGAGAGGAAGAAAAGTTTAGCAGATAAACTGGCAGTAGTGTGTAATGGTAGTACAGAATATGATGTTCTTACTCCTATGGAGAAAGAAACTTCCTTACCTCCTCCTGATTCCAAGCCCTTGAATAGATTGTGTGAAAATTTACTGAATGAGAACAATTGGCTGGTTTCTGATAAAGTTTTGGAGGGATCCTCCAAAAATGGAGCTCCAAAATTCTCTGGATCCCATGCAAAGGTAGATGGTAGTAGTCTAGACACAAAAGTCGAACTGCAAGATCCTGTTTCAGGGTTTTCACTGGAAAACAATGCTGTAATACCTGATGGTAATGTACCTCGAATGATGTCTAATGAAGCCAAGGAAAATCATTCAGTGGTCCACTCAAATCACCCAGTAAAACTGTTAGAAACTTGTGTCATTCTGAATGACTCTACTGCATCCATTCAGAAATGCAGCTCGGTATTGCATCACATTAAATCTTCTAATTATACATCTACAGAGGGATATCTTCCAAATGATGACCATCTTTATGCCAAGAAAGGAGCTGATGGAACCTCACCTCCATCTGCAATTCCTGAGGAAAATGATAATTACAAAGAATGTGCTGTTTCGGGATCTAATTTTGCTGACAGACAGGATAAGATATCAGCTATTCAGCGTGCCATGCGTAAGGCCAAAAAGCGTAGGCATGGAGACATGGCCTACGAGGGGGATGCAGACTGGGAGATTTTAACAAATGACCAATCTTTTATTGAAAACCAAGGTGTTGTAGATGATGACCGCATGCTCAGACCAAGAGTGAAGCATGATTCCTCTTTGAATGTGGATGAAGAGTCTGAAAGTGTTGCAGCAGCAGTATCTGCTGGTCTGAAAGCCCATGCAGTTGGTCCAGTTGAAAAAATAAGATTTAAGGAGATATTGAAGCGTAAAGGTGGTCTCCAGGACTATTTGTATTGCAGAAATCAGATCTTAAGTATTTGGAGCAGAGATGTCACTCGTATATTACCTCTTTCTGACTGTGGAGTTAGTGATACTCCTTCCGGGGATGAATCTTCTTGTTCTTCTCTTATTAGGGAAGTCTATGCATTTCTTGATCAATGTGGTTATATAAATGTTGGGATTGCCTCTCAGAAGAATGCTGGAATGAGGGCTGGCTGTAGTTATAAACTTGTAAAAGAAAAAGGATTTGAGGACAGTTCTACAGCTTCCATGGCTGACTCTGAAGATGGAGTTACCTTCATTATAGGTCAGGCTAATAGGTCTGATACTTCCATGAGAGTTAAGGATGACCTTAAAGTTGATTATGAAAACTTGGCACTTGTTGCTACAGAAGGCAGAAGGGATGGTGATCCAGTGATATTGGGTTCTCCAAACACAATGCAAAATGGAGAAAGAAATCTTGACGATTATCAAGAAAATGGTGGGATTCAGGCAGGTCTAAGTAGACTTGTAAACATCAACAATTCTGATCCTTCTTCCAAGAATTCTGATTGCAGAATGACTTCTATTGTAGCTACCGAGCAAAGCAATGAATCTACCTGTGTTAAATCTACCTTAGATGATCAGATACCTGATCCTTCGCAGTCTGATTCAGAGGCAAGGAAAAGAGTGATTATCATAGGAGCTGGTCCTGCTGGGTTAACTGCTGCTCGCCACTTGCAACGTCAAGGTTTTTCTGTAACTGTACTTGAGGCTAGGAATAGAGTAGGAGGTCGTGTGTTTACTGACCGTTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGCGTTGAGGCTGATGTGGACACCGAGAGAAGACCAGATCCTTCATCATTGGTTTGTGCTCAGTTGGGCATTGAGTTGACTGTGCTTAAAAGTGACTGTCCTCTTTATGACATAGTAACGGGACAGAAGGTTCCTGCAGACCTGGATGAAGCACTGGAAGCTGAATATAATAGTCTTCTTGATGACATGGTATTGCTTGTTGCCCAGAAGGGTGAACAAGCTATGAAAATGTCTCTAGAAGATGGTTTAGAATATGCTCTTACAAGGCGTCGTATGACACTCTCTGGTAGAAGTAGTGAACAAATTGAACAAAACAACATTGCACATGTGTCATCCAATTGCAAAAGAGGCAGTGCTGAGGAAAACATTATTCAAGAGGAAATTTTGAGTCCTCTAGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTCTTCTAAAAGAGGTTTCTCTTCCCTACTGGAATCAAGATGACGTATATGGTGGATTTGGGGGAGCTCATTGCATGATTAAAGGGGGTTACAGCACTGTCGTTGAGTCTCTAGGTGAAGGGCTTGTTATCCACTTGAACCATGTTGTAACAAATGTGTCATATGGTAGCAAGGAACCTGGCCAGAGTGATATAGTCAGAGTTTCTACATCAAAGGGCAATGAGTTCTTTGGAGACGCTGTCCTCATCACTGTTCCACTGGGCTGTTTGAAGGCTGGAAGTATTAAATTTTCCCCACCTTTGCCGCAGTGGAAATGCTCTTCTATCCAGCGTCTTGGCTTTGGAATTCTCAATAAGGTGGTTTTGGAGTTTCCTAATGTGTTTTGGGATGACACAGTGGACTATTTTGGAGCAACAGCGGAAGAAACAAGCAGAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGAAAAACAGTTGGGGCTCCTGTCCTTATAGCTTTAGTTGTTGGTAAGGCAGCAATAGATGGTCAGTATTTGAGCTCCACTGATCATGTCAACCATGCATTAATGGTTCTCCGTAAACTTTTTGGGGAGGCTTCAGTACCTGATCCTATTGGATATGTGGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTACTCATATGTTTCTGTTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACTTGCAAAGAGCATCCTGATACAGTTGGTGGAGCAATGATGAGTGGACTTCGTGAGGCTGTGCGTATAATTGACCTCTTGAACACTGGAAATGATTATACTGCTGAAGTGGAGGCAATGGAGGCAGCACTGAGACGGTCAGATACTGAAAGAGATGAAGTTAGGGATATAATAAAGAGACTTGATGCAGTTGAGCTTTCTAATGCCTTGTATAAGAACTCCTTAGATGGTGCTCAAATCATTACTCGTGAAACTTTACTAAGGGACACGTTCCTTAATGCAAAAACCAGTGCTGGGCGCCTGCATGTGGCTAAACAGTTGTTAAGTCTTCCTGTTGAAAACTTGAAGTCTTTTGCTGGGAGTAAAGAGGGGCTTACCATCCTAAACTCTTGGATACTGGACTCAATGGGGAAGGATGGGACTCAACTCTTGCGACACTGTTTGCGTCTGCTTGTGCGTGTTTCAACTGATCTGCTTGCTGTGCGCTTATCAGGCATTGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATACGTGCTATAGCAAGCCAGTTGGTTAATGTATGGCTTGAAATCTTCCGCAAGGAAAAAGCTTCTAACGGTGGACTGAAGTTTTCCAGACAAGCAAATTCTGCAGATTTATCAAAGAAATTATCTCTGAAAGATTCAGCCTCAGGAAAGCCACCTCTGACTATGCATCATGGTGCTTCTGAGAATAAAGGAGGCTTGCTGGCTTCTGTGTCTGCTGGAAGTAGTTCACCTTCCATTGCAAATGTGAAGAAATTGCACAGCAAACAAGTAAGACAACAGGAGGCAAATGACTCAAGTCATGGGGCCAATTCTTCCAGGTCCCAAGGTTCAGTAGGCAAAGCAGTTATGAAGGAGGACAATAACTGCAATGCTATGTCCGAAGAAGAACAGGCTGCCATAGCTGTAGCAGAAGCTGCCCGTGCTAAAGCACTTGCTGCTGCTGAGGCTTATGCCTCAGCCGAAGCCAGGTGCAATACACTGCTGCAGCTTCCAAAGATACCCTCATTCCATAAATTTGCTAGACGGGAGCATTATTCGCAAATAGATGAGTACGATAGTAGGAAAAAATGGTCTGGCGGGGTTCTAGGAAGGCAAGATTGTGTTTCAGAGATAGATTCTAGGAACTGCAGAGTTAGGGACTGGTCTGTGGATTTTTCTGCTGCTTGTGTTAACCTTGATAATTCCCGAATGTCAGTGGATAACCTATCACAGCAGAGTCATTCAAATGAGATTGCCAGTCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTTTGGACAGCAGTATATATACAAAAGCATGGATTGACACAACTAGTGGTGTTGGGATAAAAGACTGTCATGCCATTGAGAGATGGCAATCCCAAGCGGCTGCAGCTGATTCTTATTTTTCTAATCCAACCATACATTTGAAGGATGAGGAAGAATCAAATGCCTGTTCAAGATTACCCGGCTGGAAGCATGATTCTATGGCAAATGAGAGCTCTGTTTCACATGTTACTGTAAACAGGGAGGCCTTAAAATCTCATCCTCGAGGGTCAGATCGCATTAAGCAGGCTGTTGTGGATTATGTTGCATCACTGCTTATGCCCCTTTATAAGGCAAGGAAACTAGATAAGGATGGGTACAAGGCTATAATGAAGAAAAGTGCAACCAAGGTGATGGAACAGGCCACAGATGCAGAGAAAGCCATGGCTGTTCATGAATTTCTAGATTTTAGGCGAAAGAATAAGATTCGCTCCTTTGTGGACAAATTGATTGAGAGACACATGGCAATGAAACCAGATATAAAATCTTAA	6012	0.4253	MDGEVKGSGTKKRSKQVEIGIDSDDDEPIGSIFKLRRPRNSRSVSLAIEGTGDRVENAEAVGKKLVAAEEDSGGMDDTLASFRKRLKGPKRDQGSGTIRGGNSALNVLADSSLDVPSAGGVLDNVKEGQVVGDSGSDTMVIEVAGSNQGKIGRPHMDLAQKGSEDHATFDDDLVAQGSSSTLKDEKKVVLLPCDNLQHSSDEQKEDLLSVIFQNAQSNLCRKSRTSSSSKQKTGNQIVDDGLSPDLKSIPETVESMAECKSKFASASKLDSRILKSANDFPEGSDSHSSASASVMDNKLFDGGCLQEEISKGTSYSNIKNGLAVDQFSLTDVCNEDSQQFSSVQLGDVCSPSHQKVTFQERIDSDGLKQCSVMLHGVEKMADTASHSEVGEGLCGLGEGERKKSLADKLAVVCNGSTEYDVLTPMEKETSLPPPDSKPLNRLCENLLNENNWLVSDKVLEGSSKNGAPKFSGSHAKVDGSSLDTKVELQDPVSGFSLENNAVIPDGNVPRMMSNEAKENHSVVHSNHPVKLLETCVILNDSTASIQKCSSVLHHIKSSNYTSTEGYLPNDDHLYAKKGADGTSPPSAIPEENDNYKECAVSGSNFADRQDKISAIQRAMRKAKKRRHGDMAYEGDADWEILTNDQSFIENQGVVDDDRMLRPRVKHDSSLNVDEESESVAAAVSAGLKAHAVGPVEKIRFKEILKRKGGLQDYLYCRNQILSIWSRDVTRILPLSDCGVSDTPSGDESSCSSLIREVYAFLDQCGYINVGIASQKNAGMRAGCSYKLVKEKGFEDSSTASMADSEDGVTFIIGQANRSDTSMRVKDDLKVDYENLALVATEGRRDGDPVILGSPNTMQNGERNLDDYQENGGIQAGLSRLVNINNSDPSSKNSDCRMTSIVATEQSNESTCVKSTLDDQIPDPSQSDSEARKRVIIIGAGPAGLTAARHLQRQGFSVTVLEARNRVGGRVFTDRSSLSVPVDLGASIITGVEADVDTERRPDPSSLVCAQLGIELTVLKSDCPLYDIVTGQKVPADLDEALEAEYNSLLDDMVLLVAQKGEQAMKMSLEDGLEYALTRRRMTLSGRSSEQIEQNNIAHVSSNCKRGSAEENIIQEEILSPLERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGLVIHLNHVVTNVSYGSKEPGQSDIVRVSTSKGNEFFGDAVLITVPLGCLKAGSIKFSPPLPQWKCSSIQRLGFGILNKVVLEFPNVFWDDTVDYFGATAEETSRRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQYLSSTDHVNHALMVLRKLFGEASVPDPIGYVVTDWGRDPFSYGAYSYVSVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEAMEAALRRSDTERDEVRDIIKRLDAVELSNALYKNSLDGAQIITRETLLRDTFLNAKTSAGRLHVAKQLLSLPVENLKSFAGSKEGLTILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVNVWLEIFRKEKASNGGLKFSRQANSADLSKKLSLKDSASGKPPLTMHHGASENKGGLLASVSAGSSSPSIANVKKLHSKQVRQQEANDSSHGANSSRSQGSVGKAVMKEDNNCNAMSEEEQAAIAVAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREHYSQIDEYDSRKKWSGGVLGRQDCVSEIDSRNCRVRDWSVDFSAACVNLDNSRMSVDNLSQQSHSNEIASHLNFREHSGESVALDSSIYTKAWIDTTSGVGIKDCHAIERWQSQAAAADSYFSNPTIHLKDEEESNACSRLPGWKHDSMANESSVSHVTVNREALKSHPRGSDRIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVHEFLDFRRKNKIRSFVDKLIERHMAMKPDIKS	2003

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	1609	1642	-	-
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	222	238	-	-
	Dere05g2773	2003	SUPERFAMILY	FAD-linked reductases, C-terminal domain	1251	1362	-	-
	Dere05g2773	2003	Pfam	SWIRM domain	688	768	IPR007526	GO:0005515
	Dere05g2773	2003	SUPERFAMILY	Homeodomain-like	677	773	IPR009057	-
	Dere05g2773	2003	PANTHER	FLAVIN MONOAMINE OXIDASE	932	1420	-	-
	Dere05g2773	2003	SUPERFAMILY	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	1511	1595	IPR035441	-
	Dere05g2773	2003	SUPERFAMILY	FAD/NAD(P)-binding domain	931	1416	IPR036188	-
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	1654	1683	-	-
	Dere05g2773	2003	Gene3D	-	1040	1368	-	-
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	1	33	-	-
	Dere05g2773	2003	Gene3D	-	934	1411	IPR036188	-
	Dere05g2773	2003	PRINTS	Adrenodoxin reductase family signature	956	969	-	-
	Dere05g2773	2003	PRINTS	Adrenodoxin reductase family signature	933	955	-	-
	Dere05g2773	2003	Gene3D	-	677	780	IPR036388	-
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	222	245	-	-
	Dere05g2773	2003	MobiDBLite	consensus disorder prediction	1664	1681	-	-
	Dere05g2773	2003	Pfam	Flavin containing amine oxidoreductase	942	1413	IPR002937	GO:0016491
	Dere05g2773	2003	ProSiteProfiles	SWIRM domain profile.	678	778	IPR007526	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g2773	Dere-ChrDere05	38408905	38418685	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SWI/SNF-SWI3	Dere05g2773		Amino_oxidase	1.4e-105	CL0063

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere05g2773	05	38408905	38418685	Dere05g2773	05	38408905	38418685	ECH