Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2760 ATGGCTGAATCAGGCTCAGCCGCTTCCAAGAGAATGTGGTGCTCCATCCCCGAGCGTTTCCAGCTGCATGCCGCCATGTTGGCCCTGCAGTTTGGGTACGCAGGGTTCCATGTCGTCTCCAGAGCTGCCCTTAACATGGGCGTTAGCAAACTCGTTTTCCCTGTCTACCGCAACATTATTGCCTTCCTTCTCCTCCTTCCTTTTGCATACTTCATAGAAAAGAAGGATAGGCCTGGGCTTACCCTAAACTTTGTCCTTCAGTTCTTTGCTCTGGCTCTCATCGGGATAACATCAAACCAAGGGTTCTACTTACTTGGGTTGGACAACACATCGCCGACCTTTGCATCAGCAATACAGAACTCAGTTCCAGCCATCACTTTTCTGATGGCAGCCATACTAAGGATAGAGCAAGTGAGGCTGGACCGGAAAGATGGTCTGGCCAAGGTGGTCGGGACCTTATTCTGTGTTGCCGGTGCCACCGTGATCACTCTATACAAGGGTCCAACAATATACAAACCAACTCCCCCACTACACAGTACAGCCCCATTCACACCACTATTTCCCTCACTCGGAGATGCAAAGGGCAAAAACTGGACCCTCGGCTGCATCTACCTCATCGGACATTGCTTGTCGTGGTCTGGTTGGCTAGTCTTGCAAGCACCAGTTCTCAAGAAGTACCCCGCTCGCCTTTCTGTCACTTCTTTCACTTGCTTCTTTGGAATCATTCAGTTTCTGGTTATTGCTCTCATCTTCGAAAGAGACTACCAGGCTTGGGTTTTCAACTCTGGTGGAGAAGTATTCACTATCTTGTACGCGGGAGTGGTGGCATCCGGAATTGCCTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCGGTGTATCAACCTGTTCAAACTCTTGTTGTCGCTATTATGGCTTCCATTGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTAATGATCGTTGTGGGATTATACTTGGTGTTGTGGGGCAAAAGCGAAGAGAAGAAGTTCGCAAAGGAACAGCTTGCAATTACGTCCATTCCGGAGCACAGTGGTACCAGATCAGCAAGCCACGCCAAGACCTCTCTTACTCAGGCACTCCTCCTCCCTTCATCAACGGAAAATGTCTGA 1161 0.4978 MAESGSAASKRMWCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFIEKKDRPGLTLNFVLQFFALALIGITSNQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLDRKDGLAKVVGTLFCVAGATVITLYKGPTIYKPTPPLHSTAPFTPLFPSLGDAKGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSFTCFFGIIQFLVIALIFERDYQAWVFNSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVMIVVGLYLVLWGKSEEKKFAKEQLAITSIPEHSGTRSASHAKTSLTQALLLPSSTENV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2760 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 342 - -
Dere05g2760 386 PANTHER WAT1-RELATED PROTEIN 24 350 IPR030184 GO:0016020|GO:0022857
Dere05g2760 386 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Dere05g2760 386 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020
Dere05g2760 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2760 Dere-ChrDere05 38282455 38284685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2760 9 386 Nodulin-like Gene Family AT1G75500 74.740 0.0 573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2760 05 38282455 38284685 Dere04g0130 04 1385186 1387049 CCT
Dere05g2760 05 38282455 38284685 Dere05g2760 05 38282455 38284685 ECH