Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2749 ATGGAAAGCAGCTCAGTTTCAAAGCTGCTAATATTGCTCTTCACGACCTTGTTCTTTTGTTCTGACCTGACCCACGGTAGTGTAACCTACGACAGAAAGGCCATCATCATCAATGGCCAAAGGAGAATCCTCATCTCCGGTTCCATTCACTATCCCAGAAGCACTCCTCAAATGTGGGAGGATCTTATTCAGAAGGCTAAAGATGGAGGCCTAGATGTCATTGACACTTATGTCTTCTGGAATGTCCATGAACCATCTCCTGGCAATTACAACTTTGAAGGGAGATACGATCTGGTACAGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGTTCATCTTCGCATTGGGCCATATGTGTGCGCCGAGTGGAACTATGGAGGGTTTCCTGTATGGTTGAAGTATGTTCCTGGCATCAGCTTCAGAACAGATAATGAGCCTTTCAAGGCGGCAATGCTTGGCTTCACCCAGAAAATTGTCCAGATGATGAAGAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATCATTCTTTCCCAGATTGAGAACGAGTATGGACCAGAATCCAGGGAACTGGGAGATGCTGGTCGTGCGTACATAAAATGGGCTGCAAATATGGCAGTTGGAATGGGTACAGGAGTACCGTGGGTGATGTGCAAGGAAGATGACGCTCCGGATCCTGTGATAAACGCATGTAATGGTTTTTACTGTGATTATTTCTCTCCAAATAAACCATACAAGCCCACCCTCTGGACTGAGTCCTGGAGTGGCTGGTTTACGGAATTTGGTGGCCCAAATTATCAGCGACCAGTTGAAGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCTTATGTCAATTATTACATGTACCATGGAGGAACTAACTTTGGACGCTCCGCCGGAGGGCCATTCATCACTACAAGCTATGACTATGATGCTCCCATCGATGAATATGGATTGATCAGAGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATTAAGCTATGTGAACCTGCTTTGGTGTCTTCAGATCCTACTGTCACATCATTAGGAACGTATCAGCAGGCTCATGTATTTTCTACGGGGACTGGAACATGCGCAGCTTTTCTGGCAAACTATCATCCAAAGTCTGCTGCTAGAGTGACATTCAATAACAACCACTATGATTTGCCTCCTTGGTCCATAAGCATCCTCCCAGATTGCAAAACTGTTGCATATAACACTGCAAATGTGAGAGTTCAACCATCACAGATACAGATGCTGCCCACGAATTCAAAGTTGTTCAAGTGGGAGACCTATGATGAAGATTTATCTTCTCTGGCTGAAAGTTCAAGGATGACAGCTGCTGGGCTCTTAGAACAGATAAACGTTACCAGAGATACTACCGACTATCTATGGTACATAACAAGTGTTGACATTAGCTCATCAGAATCGTTTCTCCGAGGAGGACAGAAACCCAGCATCAGTGTACAGTCGGCAGGCCATGCCGTGCATGTGTTTGTTAATGGACAACTATCAGGCTCGGCTTTTGGGACAAGGGAACAAACTAGCTGCACATTTAATGGTCCCGCCAATCTACGTGCTGGAACAAATAAAATTGCCCTTCTCAGTGTAGCTGTTGGATTAGCGAATGTTGGCCTCCATTACGAAACATGGAAGACAGGGATCAGTGGTCCAGTTTTGCTGCACGGTCTTGACCAGGGAAAGAAAGATTTAACGTGGCAGCAATGGTCTTACCAGATCGGCCTGAAAGGAGAGGCTATGAATTTGGTGTCTCCTAATGGGGTCTCATCTGTTGATTGGGTACGAGAGTCACTAGCCACCCAAAGCCAGCAGCAACTGAAATGGCATAAGGCTTATTTCGATGCACCTGAAGGAGATGAACCATTGGCTTTGGACATGGGGAGCATGGGAAAGGGTCAAGTATGGATCAACGGAGAGAGCATAGGAAGGTATTGGATGGCTTATGCAAAAGGTGACTGCAATTCTTGCTCCTATTCTGGCACCTTCCGGCCCAGTAATTGCCAACTTGGTTGTGGACAACCCACCCAACGATGGTATCACGTTCCAAGATCCTGGTTAAAGCCAACCAACAACTTGATAGTTATTTTGGAAGAATTAGGCGGGAATCCTTGGAAAATAGCTCTTGTAAAGAGAACTTTGAAGAATTGA 2193 0.4528 MESSSVSKLLILLFTTLFFCSDLTHGSVTYDRKAIIINGQRRILISGSIHYPRSTPQMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVQFIKTVQKVGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNEPFKAAMLGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESRELGDAGRAYIKWAANMAVGMGTGVPWVMCKEDDAPDPVINACNGFYCDYFSPNKPYKPTLWTESWSGWFTEFGGPNYQRPVEDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKDLHKAIKLCEPALVSSDPTVTSLGTYQQAHVFSTGTGTCAAFLANYHPKSAARVTFNNNHYDLPPWSISILPDCKTVAYNTANVRVQPSQIQMLPTNSKLFKWETYDEDLSSLAESSRMTAAGLLEQINVTRDTTDYLWYITSVDISSSESFLRGGQKPSISVQSAGHAVHVFVNGQLSGSAFGTREQTSCTFNGPANLRAGTNKIALLSVAVGLANVGLHYETWKTGISGPVLLHGLDQGKKDLTWQQWSYQIGLKGEAMNLVSPNGVSSVDWVRESLATQSQQQLKWHKAYFDAPEGDEPLALDMGSMGKGQVWINGESIGRYWMAYAKGDCNSCSYSGTFRPSNCQLGCGQPTQRWYHVPRSWLKPTNNLIVILEELGGNPWKIALVKRTLKN 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 FunFam Beta-galactosidase 591 730 - -
Dere05g2749 730 FunFam Beta-galactosidase 292 420 - -
Dere05g2749 730 SUPERFAMILY Galactose-binding domain-like 582 722 IPR008979 -
Dere05g2749 730 PANTHER BETA-GALACTOSIDASE RELATED 18 728 IPR001944 GO:0004553|GO:0005975
Dere05g2749 730 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Dere05g2749 730 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Dere05g2749 730 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Dere05g2749 730 Gene3D - 439 586 - -
Dere05g2749 730 FunFam Beta-galactosidase 446 583 - -
Dere05g2749 730 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Dere05g2749 730 Gene3D Glycosidases 22 343 - -
Dere05g2749 730 FunFam Beta-galactosidase 23 343 - -
Dere05g2749 730 Gene3D - 602 730 - -
Dere05g2749 730 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2749 Dere-ChrDere05 38208010 38212501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2749 1 728 Glycoside Hydrolase AT4G36360 71.781 0.0 1141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2749 05 38208010 38212501 Dere04g0137 04 1429739 1434471 CCT
Dere05g2749 05 38208010 38212501 Dere05g2749 05 38208010 38212501 ECH