Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2742 ATGTCTCTGAACAAAGTGAGGCCAGTCGTAATGGCTTTCCTCTCAGCCACACTACTCACCCATGCTCACCCTGGTTTCAATTTCGGGTGGGGAGGTCCAGCTCTTTATCCTGAATTCTATCAGTTTTCATGCCCTCAAGTTAATGACATTGTCATGTCAGTTTTGGAGGAGGCCATTGCTAAAGATCCCAGAATGGCTGCCTCTCTGCTTAGACTTCACTTTCACGACTGCTTCGTCCAGGGCTGCGACGCATCAATTTTACTGGATGATAGTGCGGAAATCGTAAGTGAAAAGAATTCTGGGCCTAACAAAAACTCCGTAAGAGGTTTTGAAGCGATTGATGAGATCAAGTCTGAGTTGGAAAAAGCATGTCCTGAGACAGTGTCCTGTGCAGACATTGTTGCCCTTGCTGCAAGGGGCTCCACTGTTATTAGTGGAGGACCCAGCTGGGAACTCCCATTAGGCAGGAGGGACTCAAAAACAGCAAGCTTAAGCGCTTCTAACACCAACATTCCCCCTCCAAACTCCACCATAGGAAACCTTCTCACCTTCTTCAAGCGTCAGGGTCTTGATGAAGTTGACCTTGTTGCCCTCTCAGGAGGGCATACCATTGGGTTGGCAAGAGCAGATGATAAACCGGTTTTAACCAAGTTTACATGTGGATATTGA 669 0.4738 MSLNKVRPVVMAFLSATLLTHAHPGFNFGWGGPALYPEFYQFSCPQVNDIVMSVLEEAIAKDPRMAASLLRLHFHDCFVQGCDASILLDDSAEIVSEKNSGPNKNSVRGFEAIDEIKSELEKACPETVSCADIVALAARGSTVISGGPSWELPLGRRDSKTASLSASNTNIPPPNSTIGNLLTFFKRQGLDEVDLVALSGGHTIGLARADDKPVLTKFTCGY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2742 222 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Dere05g2742 222 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 CDD secretory_peroxidase 35 208 IPR033905 GO:0004601|GO:0042744
Dere05g2742 222 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 SUPERFAMILY Heme-dependent peroxidases 35 209 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 Gene3D Peroxidase, domain 2 172 209 - -
Dere05g2742 222 FunFam Peroxidase 38 181 - -
Dere05g2742 222 PANTHER PEROXIDASE 72-RELATED 34 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 Gene3D - 38 171 - -
Dere05g2742 222 ProSiteProfiles Plant heme peroxidase family profile. 34 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2742 222 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Dere05g2742 222 Pfam Peroxidase 53 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2742 Dere-ChrDere05 38164680 38167709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2742 1 208 Peroxidase AT1G44970 70.642 1.14e-112 324