Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2738 ATGTCTCCGGTTCTCAGTGAAATCCTCCGCTCCGGGTTTATGATAAATTCCTCCCTGAGGCGCAGGACCCACTTAGTTCAATCTTTCTCTGTTGTGTTCCTCTACTGGTTCTATACTCTTTGGTGTACACATCTGATGGACTTGTCCAGTGGAAATTCGTCCATGTCGACCAAATTTCAGAGCTCTGGTTCTGAAGAGGATTTGCAGGCTTTGATGGATCAGAGAAAGAGGAAGAGAATGCAATCGAATCGGGAATCAGCAAAGCGATCCCGGATGCGTAAGCAGAAGCACCTTGATGATCTGATGGCCCAAGTGAGCCAACTGAGAAAGGAAAATAGCGAAATCCTCACAAGCATAAACTTCACCACGCAGCATTATCTGAAAGTTGAGGCTGAAAACTCCATATTGAGGGCTCGAATGGCAGAACTTAGCCACAGGCTCCAATCACTGAACGATATCCTCAATTACATCAACACCAGCAATGGGGTGTATGAAACGGATAGCTATCTAACAAGTGCAGAGAACTTTATGAATCCCATGAACATGCCCTTTCTTAATCAACCCATTATGGCTTCTGCAGACATCTTTCAGTGGTGA 597 0.4523 MSPVLSEILRSGFMINSSLRRRTHLVQSFSVVFLYWFYTLWCTHLMDLSSGNSSMSTKFQSSGSEEDLQALMDQRKRKRMQSNRESAKRSRMRKQKHLDDLMAQVSQLRKENSEILTSINFTTQHYLKVEAENSILRARMAELSHRLQSLNDILNYINTSNGVYETDSYLTSAENFMNPMNMPFLNQPIMASADIFQW 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2738 198 CDD bZIP_plant_GBF1 76 126 IPR045314 GO:0003700|GO:0006355
Dere05g2738 198 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Dere05g2738 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Dere05g2738 198 SUPERFAMILY Leucine zipper domain 75 128 IPR046347 GO:0003700|GO:0006355
Dere05g2738 198 PANTHER BZIP TRANSCRIPTION FACTOR 44 56 195 - -
Dere05g2738 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Dere05g2738 198 MobiDBLite consensus disorder prediction 73 96 - -
Dere05g2738 198 Coils Coil 91 118 - -
Dere05g2738 198 Gene3D - 73 126 - -
Dere05g2738 198 FunFam BZIP transcription factor 73 124 - -
Dere05g2738 198 Pfam bZIP transcription factor 75 128 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2738 Dere-ChrDere05 38123649 38124416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2738 69 198 bZIP Transcription Factor Family AT4G34590 56.115 5.50e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g2738 bZIP_1 9.4e-10 CL0018