Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2736 ATGGTTTTCTGCGACATCGTCGACCTTTCCCGTATCAGGGATTTGCAGTACTGGAAGCATAAAGTTTTGATTTTTCGGGTAAAGGGAATGGCGACTCCTGTTGAGCCTCCAAATGGGATCAGAGCTGAAGGAAAGCATTATTACTCCATGTGGCAAACCCTGTTTGAGATTGATACTAAATACGTGCCCATCAAGCCTATTGGTCGAGGAGCGTATGGAATTGTGTGCTCTTCGGTCAATAGAGAAACCAATGAAAAAGTTGCAATCAAGAAGATACAAAATGCTTTTGAAAACCGTGTTGATGCACTGAGAACTTTGCGTGAATTGAAACTTCTTCGGCACCTCCAACATGAAAATGTGATTGCTTTAAAAGATATCATGATGCCTATTCATAGAAAAAGTTTCAAGGATGTCTATCTGGTTTATGAACTAATGGACACAGATTTGCATCAGATTATTAAGTCTTCGCAAGCACTATCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAGTATCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAGCCAGGGAATCTTCTAATCAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACCAGCAGCAGCAAGAACCAGTTCATGACTGAGTATGTTGTCACTCGATGGTATAGAGCACCAGAGCTCCTACTTTGCTGTGACAACTATGGGACATCTATTGATGTCTGGTCTGTGGGATGCATTTTCGCAGAGCTTCTTGGGCGAAAACCTATTTTTCCAGGCTCAGAGTGTCTCAACCAGTTAAAACTAATTATCAACATTCTTGGCAGCCAAAGGGAGGAGGATCTTGAATTTATTGATAATCCAAAGGCAAAGAGGTTCATCAAATCCCTTCCATATTCTCCCGGAACCCCCTTTGCCCGCCTTTACCCCAACGCCCATCCATTGGCAATTGATCTACTGCAGAAGATGCTTGTTTTTGACCCATCAAAGAGGATTAGTGTTACTGAAGCTCTTCAACACCCTTATATGTCCCCTCTGTATGATCCTAATAGTGACCCTCCAGCCATTGTTCCTATTGATCTTGAGATAGAGGAAGATTTAGGGGAAGAAATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAAGCTGCTGCGGCAAATACAGTGGTGTGCACATGA 1206 0.4245 MVFCDIVDLSRIRDLQYWKHKVLIFRVKGMATPVEPPNGIRAEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLQHENVIALKDIMMPIHRKSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDLEFIDNPKAKRFIKSLPYSPGTPFARLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSDPPAIVPIDLEIEEDLGEEMIREMMWKEMLHYHPEAAAANTVVCT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2736 401 FunFam Mitogen-activated protein kinase 47 155 - -
Dere05g2736 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Dere05g2736 401 Pfam Protein kinase domain 62 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2736 401 CDD STKc_TEY_MAPK 55 390 - -
Dere05g2736 401 ProSiteProfiles Protein kinase domain profile. 61 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2736 401 SMART serkin_6 61 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2736 401 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 60 363 - -
Dere05g2736 401 SUPERFAMILY Protein kinase-like (PK-like) 53 355 IPR011009 -
Dere05g2736 401 FunFam Mitogen-activated protein kinase 145 374 - -
Dere05g2736 401 Gene3D Transferase(Phosphotransferase) domain 1 145 374 - -
Dere05g2736 401 ProSitePatterns Protein kinases ATP-binding region signature. 67 91 IPR017441 GO:0005524
Dere05g2736 401 Gene3D Phosphorylase Kinase; domain 1 48 384 - -
Dere05g2736 401 ProSitePatterns MAP kinase signature. 96 199 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2736 Dere-ChrDere05 38092366 38095846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2736 30 397 MAP Kinase Gene Family AT1G10210 86.957 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere05g2736 Pkinase 1.7e-72 CL0016