Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2734 ATGGAATCTAGTCAATCTCCCAATCTCCATCACCTCCAACTCCAACCTCAGCCTGTTGACACCCCATCTTGCTATGGGATTAATGGAAGCACCCCTTCTTGGTCACCACAAATCTATTCGAATGCTGGTAACTTGAACCAAATCATCCAGGAAGCAGCCTCCAGATCAAGAGATTCAACTCTCAACAGTTGTATGATCCAAGATTTAGGATATCATCAGTGGGGAAGTGATGCAGAAAGCTGGTTGATAAAGGAAGAGATGTGTGATACTTTTCCCAAATCCACAGAAATGCTAAACAACAGTGCCCCAGGTAGGGAACAACACTACCGGGCGCTTCAGGAGCAGAAAGACCAGTTGAATGGTGTTAGTGAGAAGCTTCTGCTCAACACCCTATCTTCCTCAAACTTTTACTCCAATAGTGCCGGTGGTTTGGGAGCTCCAAGCAGAGGAAACTTTAGCCAGATTTACCCAACTATAAACATCTCTAACTTAAACCATTCGTCCCAAGCAATTTCAAACTCCTCCAACATGAATTTGCACTCTTTACATCCTTTAAACTCAGTAAGATTTAATGGGGACTCCAGCCGTTCTTTACATATGCGGCACCCCATTGAGAGTTCGCGGACGTATAACTCTAGTATTCCATCGCACTTCACCAGTGCCATGGTAGAAACAAAGAGACCCAGCGCTTTAATGGAGTCAAAGCCTTCTCCATCTCAAACGGCTTCAAAGAAATTACGACCAGAATCACGCTCATCGTGCCCACCCTTAAAGGTTAGAAAAGAGAAACTAGGAGACAGGATAGCTGCTCTTCAGCAGCTGGTGGCTCCTTTTGGCAAGACAGACACTGCATCGGTTCTCATGGAGGCTATTGGATACATCAAGTTCCTTCAAAACCAAGTTGAGACGTTGAGTGTCCCATACATGAAGTCATCACGGAACCAGAACAACAGAATGATGCAAGGGGGTTCTTCAGGCAAAGACGGCGCAGGGGACACAGCAAAGCGAGATCTTAGAAGCCGAGGCCTTTGTCTCGTCCCATTATCCTGCATGTCCTACATAACAGATGATCATGGTGGCACTGGAGTCTGGCACCACCCTAGCTTTGGTGGAGCATCTTAA 1122 0.4617 MESSQSPNLHHLQLQPQPVDTPSCYGINGSTPSWSPQIYSNAGNLNQIIQEAASRSRDSTLNSCMIQDLGYHQWGSDAESWLIKEEMCDTFPKSTEMLNNSAPGREQHYRALQEQKDQLNGVSEKLLLNTLSSSNFYSNSAGGLGAPSRGNFSQIYPTINISNLNHSSQAISNSSNMNLHSLHPLNSVRFNGDSSRSLHMRHPIESSRTYNSSIPSHFTSAMVETKRPSALMESKPSPSQTASKKLRPESRSSCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNQNNRMMQGGSSGKDGAGDTAKRDLRSRGLCLVPLSCMSYITDDHGGTGVWHHPSFGGAS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2734 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 248 297 IPR011598 GO:0046983
Dere05g2734 373 Gene3D - 258 321 IPR036638 GO:0046983
Dere05g2734 373 MobiDBLite consensus disorder prediction 232 248 - -
Dere05g2734 373 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 118 352 - -
Dere05g2734 373 MobiDBLite consensus disorder prediction 204 223 - -
Dere05g2734 373 Coils Coil 105 129 - -
Dere05g2734 373 MobiDBLite consensus disorder prediction 1 27 - -
Dere05g2734 373 MobiDBLite consensus disorder prediction 194 259 - -
Dere05g2734 373 CDD bHLH_AtbHLH_like 258 305 IPR045239 -
Dere05g2734 373 MobiDBLite consensus disorder prediction 314 334 - -
Dere05g2734 373 FunFam Transcription factor bHLH123 family 258 320 - -
Dere05g2734 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 258 311 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2734 Dere-ChrDere05 38076744 38079925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2734 22 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 41.176 2.09e-61 202