Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2707 ATGGGTTGGACGAAAGAAGAGAACAGAAGGTTTGAGGATGCACTTGCAGTGTACGGGCCCGAAGACCCAGATAGGTGGCAACATGTAGCGAACGCCGTTGGTGGAAAATCGGCACAAGAAGTGAGAAGGCACTATGAGATCCTCATGGAGGATGTCAATCGAATTGAGCGCGATCAAGTCCCATTACCCAGATACACTACGAACTCAAGGCAAACTAGCCGGGACGCTAGCGGGATGATGAGGAATCTAAATCTCCGGTGA 261 0.5057 MGWTKEENRRFEDALAVYGPEDPDRWQHVANAVGGKSAQEVRRHYEILMEDVNRIERDQVPLPRYTTNSRQTSRDASGMMRNLNLR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2707 86 MobiDBLite consensus disorder prediction 62 86 - -
Dere05g2707 86 FunFam Transcription factor SRM1 1 62 - -
Dere05g2707 86 CDD SANT 3 45 IPR001005 -
Dere05g2707 86 Gene3D - 1 62 - -
Dere05g2707 86 MobiDBLite consensus disorder prediction 59 86 - -
Dere05g2707 86 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Dere05g2707 86 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Dere05g2707 86 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Dere05g2707 86 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 74 IPR044636 GO:0003700
Dere05g2707 86 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Dere05g2707 86 Coils Coil 38 58 - -
Dere05g2707 86 SMART sant 3 51 IPR001005 -
Dere05g2707 86 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2707 Dere-ChrDere05 37866863 37867975 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere05g2707 Myb_DNA-binding 7.1e-09 CL0123