Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2705 ATGCACTACGAGAATTACGATCTTTCATTCCCTGACCAGCCTGTGGTCGATCTGTACCTCCCAGTGTGGGCTAACCTACCCTCCTTCCGCTCCAAACCGGCCTTCATTTGGTCCGAAGGAAAATCCACCACCCCCAGTACTCTCCTCACCTACTCTCAACTTAACTCCTCAGTGAACCTCCTTTCTTCAAAGCTCCTCATTCCATTACGAAGACGAGACACTGTCATCATCTTGTGCCCTCCTGGACTCCTATTAGTCAAGCTCATCTTTGCGTGTCAAAGGGCTGGCCTTTTGAGCGTCCCTATCATCCCTCCTCATCCCTCTTTTGCTCATGACAATTATCACCACCTTATCAGAGCCCTTTCACAGACAAAACCCCGTGCTGCCTTGGCTAGTTCTGACTACATCGCTAGTGTTCAACACTACGTGTCTTCTTGCCCCCATAAGAATGAGAACCTGGCTCGCATGTTACAAAACATCCGTTGGATCTCTATTGATGACGACGACGACGACGTCAAAGATGGTAATTTTGTAAATTTGAATAACTCTAATGATTCTGTGGCATACAATGGCTGCAAAGCAGACGAGTTGTATTTGGTTCAGTACACGTCGGGTTCCACTGGGATTTCAAAACCCGTGCTTGTCACAGCTGGATCAGCAGCTCACAATGTTAGGACTGCAAGGACAGCCTATGATCTCCACCCAAACAGCGTGATTGTTTCATGGCTGCCTCAATACCATGATTGTGGTCTCATGTTTCTATTATTGACCGTTGTATCCGGTGCCACGTGCATCCTCACCTCCCCAGCTGCATTCATCAACCGCCCAAGACTCTGGCTTGAATTGATGTCGGAGTTCAAGGCCACATGTACTCCTGTTCCGTCATTCGCGTTGCCACTCGTCGTCAAGCGAGGTGGGATACACCAAGGACCTATTCTTATAAATCTTTCGAGCTTAAAAAACCTTATAATCATCAATGAGCCCATTTACAGAGCTTCGGTTGAAGAATTCGTTCGTGTTTTTATTCCATTTGGGTTGAATCCCTCCTCCATCTCTCCTTCTTATGGATTAGCAGAGAATGGTACTTTTGTTTCAACTGCTTGGAGAGGTAATGATAACTATTCTAGCTTTCTAGAGTTTCCAACTCATAGCAAGCTTTTGCCAGTTGCGAGGCTTGCTTATAATTCCTCTCAAGAGGACATGGACATCGTAGTTGTAAACGAAGAAACATGTGAGGCGGTTGAGGATGGGATTGAAGGAGAGATATGGGTTTCATCACCAAGCAATGCATCTGGCTACCTCGGACATCCTTCCTTAACGAGGGAGGTCTTTCATGGAAGACTAAGAAACATGGTTGGAAGGTGTTTTGTTCGAACTGGCGATACAGGGGTCGTTAAAGGAGAACAGAGGTTTCTGTTTGTGACTGGTCGTTGCCAAGACGTTATATATCTCCAAGGTGGTCGAAAGGTTCATCCTCATTACATTGAGACTGCGGCATACAAGACGAGTCCAAAGTTACTTAGAGGGGGTTGTATTGCGGCATTTAAGATTTCAACGACAATTGCGGTTGTGGCAGAGATGCAGAGGATTGAAAAAGACACGAGGATTTTGAAGAGAATTTGTGAAGAGATTAGAGAGGGTGTTGCGAATGAAGAGAAGGTTGAGGTTGGATTGGTGGCTTTGGTTAAGAGTGAGAGTGTTCCAAAAACAACTTCTGGGAAAATAAAGAGATGGGCGGCTAAGGAGAAGTTTATTGCAGGAAAAATGACAGTTATGATGGAGATGAAGTTCGGAAATGATGTTGACCATTTGGCTCAGTATGGAGGTGAGCTCGTTAGAGGAAGCCAAGAGGTAAGAGCAGGACCTCGTACGCCATTAATGTCATTTATGTGA 1893 0.4564 MHYENYDLSFPDQPVVDLYLPVWANLPSFRSKPAFIWSEGKSTTPSTLLTYSQLNSSVNLLSSKLLIPLRRRDTVIILCPPGLLLVKLIFACQRAGLLSVPIIPPHPSFAHDNYHHLIRALSQTKPRAALASSDYIASVQHYVSSCPHKNENLARMLQNIRWISIDDDDDDVKDGNFVNLNNSNDSVAYNGCKADELYLVQYTSGSTGISKPVLVTAGSAAHNVRTARTAYDLHPNSVIVSWLPQYHDCGLMFLLLTVVSGATCILTSPAAFINRPRLWLELMSEFKATCTPVPSFALPLVVKRGGIHQGPILINLSSLKNLIIINEPIYRASVEEFVRVFIPFGLNPSSISPSYGLAENGTFVSTAWRGNDNYSSFLEFPTHSKLLPVARLAYNSSQEDMDIVVVNEETCEAVEDGIEGEIWVSSPSNASGYLGHPSLTREVFHGRLRNMVGRCFVRTGDTGVVKGEQRFLFVTGRCQDVIYLQGGRKVHPHYIETAAYKTSPKLLRGGCIAAFKISTTIAVVAEMQRIEKDTRILKRICEEIREGVANEEKVEVGLVALVKSESVPKTTSGKIKRWAAKEKFIAGKMTVMMEMKFGNDVDHLAQYGGELVRGSQEVRAGPRTPLMSFM 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2705 630 Gene3D - 479 601 IPR045851 -
Dere05g2705 630 SUPERFAMILY Acetyl-CoA synthetase-like 27 586 - -
Dere05g2705 630 Gene3D - 3 478 IPR042099 -
Dere05g2705 630 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 7 595 - -
Dere05g2705 630 CDD FAAL 31 586 IPR040097 GO:0008610
Dere05g2705 630 Pfam AMP-binding enzyme 29 484 IPR000873 -
Dere05g2705 630 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2705 Dere-ChrDere05 37851921 37853813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2705 193 581 Monolignol Biosynthesis Gene Families AT4G19010 26.000 1.02e-13 72.4