Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2700 ATGACGACAAGCTCGAGTTGGACAGCGAAGCAAAACAAAATGTTTGAGAATGCTTTGGCAATCTACGACGAGGACACCCCAGATCGGTGGCAGAAACTGGCAAGGGCCGTTGGAGGGAAGACAGTGGAGGAAGTGAAGAGGCATTATGACAGCCTTGTGGAAGACCTCAGGCAGATCGAGGAAGGCCAAGTGCCCTTGCCCAATTACACTAACCATAATCCCTACAATTACATGGATGAACAACAAAGGATGAAGACTCTGAAACTGCAGTGA 273 0.4872 MTTSSSWTAKQNKMFENALAIYDEDTPDRWQKLARAVGGKTVEEVKRHYDSLVEDLRQIEEGQVPLPNYTNHNPYNYMDEQQRMKTLKLQ 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2700 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 76 IPR044636 GO:0003700
Dere05g2700 90 Gene3D - 1 66 - -
Dere05g2700 90 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Dere05g2700 90 SMART sant 3 55 IPR001005 -
Dere05g2700 90 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Dere05g2700 90 FunFam Transcription factor SRM1 1 66 - -
Dere05g2700 90 CDD SANT 6 53 IPR001005 -
Dere05g2700 90 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2700 Dere-ChrDere05 37777869 37778459 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere05g2700 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2700 05 37777869 37778459 Dere05g2700 05 37777869 37778459 ECH