Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2699 ATGATTAAACGAAACTTAAGTTTCCCAAACATTGTGATGGAATTACAGCGAGTGTTACTGAAGACAGCTTTAATCTTGCTTTTTGTTCAGTTTGGTTTAGCTCAAGGAATATCTTTGAACTCCAGAATAGAATGGCTTGCGTTGCGTCAGCTTCGCTCGTCGTTGGGGATTCGGGGCAAGGACTGGCCCATAAAAGCCGAGCCGTGCAGGAAATGGACCGGGGTTCGGTGCCAGGACGGGCGGGTAGTAGGGATCAACATATCCGGTTTAAGACGAACTCGAGTCGGGCGTCTCCAACCCCGTTTTGCAGTGGATTCTCTCGCCAATTTCACACTCTTAGTGTCATTCGAAGCTTCTGGGTTCTTGCTTAATGGGTCTATTCCTGACTGGTTCGGACAGCGCCTTAATACACTCCAAGTTCTCGATCTAAGTTCTTGCTCGCTTATGGGTCTCATTCCCTCATCGCTCGGGAATTTGAGGGAGTTGAAGTCCCTGAATCTATCGGATAATCGTCTCACTGGTAGAATACCTTCCACATTGGGACAATTATCGAGTTTATCAGGTCTTGATCTCTCAAGAAATTTGCTTAGTGGATCAATGCCCAGCTCTTTCTCGTCTCTGGTCAATCTCACAAGTCTTGACCTTTCTTCTAATTCTTTATTTGGGTCCATTCCAGTCTATCTTGGTACCCTTTTTAGACTTCAGACCTTGAATCTTTCCGACAATGACTTCTCTGCTTCAGTACCTTATCAACTGGGTAATCTTTCTCAGTTAGTTCAACTTGATCTGAGCAGCAATTCTTTGTCTGGGTCATTGCCAGATGGTTTATTTTCTAATCTTTCTCTTCTACGAGCTTTATCCCTCAGTGGGAATGATGTTGATGGCGATCTTCCTGCTACATTGTGGTCAATGAGCAACTTGTCCTTCCTTGATGTATCCAGTAACAACCTCACTGGTACCCTGCCAAAACTTGGCTCAAGTGTTTATTCTGCTGGTGCTATATTCAATCTCTCAAACAATTTATTCTATGGATTTCTTAATACTTCCTTTAAAAACTTTTCGATCATTGATTTGTCCAGTAATTATTTCCAAGGCGAGGTACCTGATCATGGCTTAGGTAATGTTACTCTAGCTAGCAACTGCCTTACGATGAGTCCGGAACAAAAGAGTTCTACAGATTGTAGACTGTTTTATGCTCAGAGAAGGCTAATCTACATTGGTGCCCAAGAACCAGCACCATCGCCGTTGGCCGAATTAGAGTCCAGAAACAACAAACGAGTGATATTCATTTTGGCTGGTACATTTGGTGGGCTTGTGTTTACTGTGATTCTAGTTTTGGTCGTCGTACTGCTTCTAGGAAAATTTGATCATAGCACAGAAAACCAAAGAAAAACAGCGAATGTGGGACCCGTCCCAGAGGGAGAAAGTCCTGCGCCTCCTGAGGATCCTGTCTTAGAAACTGGTAAAGGAGAATCATTTAGTTATGAGCAAGTTCTCCATTTGACGGGCAATTTTGCTGAAGCTAATATCATCAAGCATGGTCACTCTGGGGACCTATTCAGGGGAATCTTGGAAGGTGAAGTAAGTGTAGTTGTGAAAAAGGTAGATTTGAACTTTGTCAAGAGAGAATCATACATGTTGGAATTGGAACTATTTAGCAAGGTTTCACATACAAGATTGGTGCCGCTATTAGGGCACTGCTTGGAGAGTGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTGTTTGCACAAAGTGAGTGGCCCGGATGATAAAGTGCAGTCCCTGGATTGGATCACCAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTATATCACCTGCATGAGTGTAGCCCTCCCCTTGTCCACAGAGATGTCCAGGCAAGCAGTATACTTCTTGATGATAAATTTGAAGTGAGACTTGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATCTTCATCAGAGTGTCATCACAAGGTTATTTCGCAAGTCACAATCTTTCGATCAAAACAATTCTGGTTCATCATCTGTGACTTGCGCTTATGATGTGTACTGTTTTGGGAAGGTCCTACTGGAGCTTGTTACAGGTAAGCTTGGTGTTAGCAAAACAGACGATGCCACCACAAGAGAATGGATAGAGCTAACCTTGTCTTACATAAGCATATATGACAAGGAGCAGGTTACAAGGATAGTAGACCCATCTCTGATAGTGGATGAGGACCTATTGGAAGAAGTATGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCCAAGCCTTTTAAACGCCCTCCAATGGGGTATGTCCTAAAAGCACTGGAAAATCCATTGAAGATAGTGAGAGAAGAGTATAATAGCTCGGCCAGATTGAGAACGACTTCATCAAGGAGATCTTGGAGCACAGCATTCTTTGGAAGCTGGAGACAGAGCTCATCGGACAGTGCTACTACTACTGCAAATAAAGAGGGTGGTACAGTGAGTGGCTTTAAACAAACAGGAAGAGTAGGGTCTCAGGGTAGTGGTGGAAATGATCACTCTTCTTCCCATAAGAGGTTATCCAATGAAATTTTCCCTGAACCATTGGAAATACAGGATGTGGAGACTGGAGAGGCAAGATGA 2646 0.435 MIKRNLSFPNIVMELQRVLLKTALILLFVQFGLAQGISLNSRIEWLALRQLRSSLGIRGKDWPIKAEPCRKWTGVRCQDGRVVGINISGLRRTRVGRLQPRFAVDSLANFTLLVSFEASGFLLNGSIPDWFGQRLNTLQVLDLSSCSLMGLIPSSLGNLRELKSLNLSDNRLTGRIPSTLGQLSSLSGLDLSRNLLSGSMPSSFSSLVNLTSLDLSSNSLFGSIPVYLGTLFRLQTLNLSDNDFSASVPYQLGNLSQLVQLDLSSNSLSGSLPDGLFSNLSLLRALSLSGNDVDGDLPATLWSMSNLSFLDVSSNNLTGTLPKLGSSVYSAGAIFNLSNNLFYGFLNTSFKNFSIIDLSSNYFQGEVPDHGLGNVTLASNCLTMSPEQKSSTDCRLFYAQRRLIYIGAQEPAPSPLAELESRNNKRVIFILAGTFGGLVFTVILVLVVVLLLGKFDHSTENQRKTANVGPVPEGESPAPPEDPVLETGKGESFSYEQVLHLTGNFAEANIIKHGHSGDLFRGILEGEVSVVVKKVDLNFVKRESYMLELELFSKVSHTRLVPLLGHCLESENEKFLVYKYMPNRDLATCLHKVSGPDDKVQSLDWITRLKIAIGAAEGLYHLHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVTAQGDLHQSVITRLFRKSQSFDQNNSGSSSVTCAYDVYCFGKVLLELVTGKLGVSKTDDATTREWIELTLSYISIYDKEQVTRIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPMGYVLKALENPLKIVREEYNSSARLRTTSSRRSWSTAFFGSWRQSSSDSATTTANKEGGTVSGFKQTGRVGSQGSGGNDHSSSHKRLSNEIFPEPLEIQDVETGEAR 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2699 881 Gene3D Ribonuclease Inhibitor 46 178 IPR032675 -
Dere05g2699 881 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 252 792 IPR046959 -
Dere05g2699 881 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Dere05g2699 881 MobiDBLite consensus disorder prediction 818 881 - -
Dere05g2699 881 Pfam Leucine rich repeat 160 220 IPR001611 GO:0005515
Dere05g2699 881 ProSiteProfiles Protein kinase domain profile. 505 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2699 881 SUPERFAMILY Protein kinase-like (PK-like) 484 782 IPR011009 -
Dere05g2699 881 Pfam Protein tyrosine and serine/threonine kinase 510 718 IPR001245 GO:0004672|GO:0006468
Dere05g2699 881 Gene3D Ribonuclease Inhibitor 276 392 IPR032675 -
Dere05g2699 881 Gene3D Ribonuclease Inhibitor 179 275 IPR032675 -
Dere05g2699 881 FunFam Predicted protein 478 580 - -
Dere05g2699 881 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 226 321 - -
Dere05g2699 881 Gene3D Transferase(Phosphotransferase) domain 1 581 804 - -
Dere05g2699 881 MobiDBLite consensus disorder prediction 818 856 - -
Dere05g2699 881 FunFam Leucine-rich receptor-like protein kinase family protein 127 225 - -
Dere05g2699 881 ProSiteProfiles cAMP/cGMP binding motif profile. 510 559 IPR000595 -
Dere05g2699 881 SUPERFAMILY L domain-like 58 322 - -
Dere05g2699 881 Gene3D Phosphorylase Kinase; domain 1 481 580 - -
Dere05g2699 881 FunFam Putative LRR receptor-like serine/threonine-protein kinase 581 802 - -
Dere05g2699 881 SMART LRR_typ_2 304 327 IPR003591 -
Dere05g2699 881 SMART LRR_typ_2 183 206 IPR003591 -
Dere05g2699 881 SMART LRR_typ_2 135 158 IPR003591 -
Dere05g2699 881 SMART LRR_typ_2 255 279 IPR003591 -
Dere05g2699 881 SMART LRR_typ_2 207 231 IPR003591 -
Dere05g2699 881 SMART LRR_typ_2 159 182 IPR003591 -
Dere05g2699 881 MobiDBLite consensus disorder prediction 462 487 - -
Dere05g2699 881 PRINTS Leucine-rich repeat signature 162 175 - -
Dere05g2699 881 PRINTS Leucine-rich repeat signature 207 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2699 Dere-ChrDere05 37766970 37770490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2699 44 674 Miscellaneous Gene Families AT2G16250 49.700 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Dere05g2699 PK_Tyr_Ser-Thr 4.1e-19 CL0016