Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2689 ATGTTTCATGCCCAGAGAAATTCTCAACATGACCAGGAAAGTAGTAAGCCTTACACTGAATCGAAGATTGAAGAGCTCAAGGCTGCAATGGAGCCCTTATCTGGACGCAGCTTAAAGTACTGCACGGATGGTTGTTTGAGGGGGTATCTAGAAGTTAGCAATTGGAATGTAAAAAAGGCCAAGAAGATGTTGGAGGACACACTCAAGTGGAGATCAACCTACAAGCCTGAGGAAATCCGCTGGCATGAGGTTGCAATGGAAGGGGAGACAGGGATAATGTACAGAGCGAGTTTTCGTGATCGACAAGGAAGGACTGTCCTTGTAATGAGACCTGGGATTGGGATAGAGAAAGCATCTTCAATGGAAAATCTGATTCGGTTTAATGTGTACCTTCTGGAAAATGCTGTGCTTAACTTTCCACAAGGTCAAGAACAAATGACGTGGTTGGTAGACTTCACTGGATGGTCATTCGCCAAGAGTATGCCCATTAGAACATCCAGAGAAATTATCAGAATTCTACAAAATCACTATCCTGAGAGGCTCGCCGTAGCAATTCTTTACAATCCTCATCGCACTTTTGAAGCTTTCTGGAAGATAGTGAAGTACTTCTTAACTAACAAGACAATGGAGAAGGTGAAATTCATATACCCAAAACAGAAGGAGAGCGTGGATCTCATGAACTCATATTTTGATGAGGAAAATCTTCCCACAGAATTTGGGGGAAAAGCCACATCGAAGTATAACCACGAAGAGTTTTCTAGATTAATGGCTCAGGACGATTTGAAATCCGCTACGTTTTGGGGAACTCATGACAAGCTCTGA 822 0.4282 MFHAQRNSQHDQESSKPYTESKIEELKAAMEPLSGRSLKYCTDGCLRGYLEVSNWNVKKAKKMLEDTLKWRSTYKPEEIRWHEVAMEGETGIMYRASFRDRQGRTVLVMRPGIGIEKASSMENLIRFNVYLLENAVLNFPQGQEQMTWLVDFTGWSFAKSMPIRTSREIIRILQNHYPERLAVAILYNPHRTFEAFWKIVKYFLTNKTMEKVKFIYPKQKESVDLMNSYFDEENLPTEFGGKATSKYNHEEFSRLMAQDDLKSATFWGTHDKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2689 273 MobiDBLite consensus disorder prediction 1 20 - -
Dere05g2689 273 SUPERFAMILY CRAL/TRIO N-terminal domain 17 83 IPR036273 -
Dere05g2689 273 Gene3D - 3 270 IPR036865 -
Dere05g2689 273 PANTHER GH16843P 7 272 - -
Dere05g2689 273 FunFam Phosphatidylinositol transfer protein 3 2 273 - -
Dere05g2689 273 Pfam CRAL/TRIO domain 99 241 IPR001251 -
Dere05g2689 273 SUPERFAMILY CRAL/TRIO domain 81 256 IPR036865 -
Dere05g2689 273 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 247 IPR001251 -
Dere05g2689 273 SMART sec14_4 87 244 IPR001251 -
Dere05g2689 273 CDD SEC14 99 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2689 Dere-ChrDere05 37661154 37662349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2689 40 236 Acyl Lipid Metabolism Gene Families AT1G55840 27.570 3.81e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2689 05 37661154 37662349 Dere05g2689 05 37661154 37662349 ECH