Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2685 ATGGCAATCTTCCTCCCTCACTCTGCTATTTTTGCATTTCTTGCTTTCTTTCACGCATTTAGTCTTGCCTATTCTCAATCGTTTATTGGCGTGAACTATGGACAAGTGGCGGACAATCTTCCACCACCGTCAGCCACCGCCAAGCTTCTTCAATCCACTTCCATCGAGAAGGTCCGATTGTACGGATCTGACCCTGCCATAATCAAGGCCCTCGCCAACACCGGCATAGGAATCGTCATCGGAGCAGCAAACGGCGACATACCAGCACTTGCTTCTGACCCCAACTTCGCAAGAAACTGGATCAACTCCAACGTGATTCCCTTCTACCCTGCCAGCAAGATCATCCTCATCACCGTGGGAAACGAGGTCATGACCTCCAATGACCAGAATTTGATTAATCAATTGTTACCGGCGATGCAGAATCTCCAAAATGCCTTCAATTCCGCATCCCTGGGGGAAAAGATTAAGGTCTCCACCGTACATTCAATGGCTGTGCTGAGGGAATCGGAACCTCCGTCCTCCGGAAGGTTCCACCCGAGCATGATGAAAGTCTTGAAGGGATTGCTTGGGTTTAATAACGCCTCCGGTTCGCCCTTTGCGATCAATCCGTACCCATACTTTGCCTACAAGAGCGACCCCAACAGGCCCGAGAACCTAGCCTTTTGTCTCTTTCAACCAAACTCGGGCCGATTTGACTCAAACACCAAAATCAAGTACATGAATATGTTCGATGCCCAGGTGGATGCAGTTCGTTCTGCTTTGGATTCCATGGGCTTCATGAACGTTGAGATTGTGGTCGCTGAGACTGGCTGGCCATACAAAGGAGATAGTGATGAGGCTGGTCCAAGTTTCGAGAATGCCAAGGCTTATAACGGTAACTTGATCGCGCATCTTCGTTCCAAGGTGGGGACCCCATTGATGCCAGGGAAATCAGTTGACACATACCTCTTTGCGCTATACGACGAGGACTTAAAGCCCGGACCTTCTTCCGAGCGGGCCTTTGGGCTTTTCAAGCCTGATCTAACCATGACCTATGATGTTGGACTCACCAAGCAGAATGGCCAGAAGGCTCCGGATATGCCAAAACCTCCGGTGACTCCAATGCCAACACCTGTTACTCCATCACCAACAACTCCGAAGAAAGATGTATGGTGTGTGCCCAAAGCAGGGGTATCAGACGCACAGCTTCAAGCAAATTTAGATTATGCTTGTGGACACGGGATTGATTGTACCCCAATCCAACCTGGTGGGGCCTGTTTTGAACCGAACACAGTGACAGCGCATGCTGCATATGCTATGAATCTCTATTACCAAGCTGCTGGTCGATATCCCTGGAATTGCGATTTCTCCCAAACAGCCATTCTGTCATCGAGTAATCCTAAGATTAAAGTGCAATGTGTTGCCAAACCCAATCATGGAACGGACTTTGGAAAAAAGTTAGATACTCGTGTAGAAAGCGAGAACAAGAAAGAAAACAGAAAGTGGGAAAAAGGAAGATCTTATATGGCGACGAGAGAGAGGGAGAGAGATCTAGAGCTCCTCATCCCAGTCTCAGGAATCTCTGATATTAATGTAGGAGGCTCTAAATCATCCTCCACCTCTTCTTCTCCTCCCGCTATAATTTCCACACATCACCACTCCGGCCAAGAGGCATTTTCCAAGGTAATTCGCAGCTGGGCCTCCAAGAAGTTTATGTCAGGATGTGTCATCCTTCTTCCTATGGCTATAACATTCTATATCACCTGGTTTTTTATCCGCTTTGTGGATGGCTTCTTCTCCCCTATATATAACCATCTAGGGATCAATATTTTTGGTCTCGGATTTCTTACTTCCATCACCTTCATCTTCTTAGTTGGCATTTTCATGTCATCATGGTTGGGAGCTTCTGTTCTCACCCTTGGGGAATGGTTCATCAAGAAAATGCCTCTTGTAAGCTATATCTATACTGCCTCAAAGCAAATAAGTACTGCAATATCACCAGATCAAAATTCAAATGCTTTCAAGGAAGTTGCCATCATAAGGCATCCTCGTGTCGGTGAATATGCATTGGGGTTCATTACTTCTTCCGTCATACTGCAGAGGAACTCAGATGAAGAAGAGCTTTGTTGCGTTTATGTTCCCACCAATCACTTATATCTTGGAGATATTTTTCTCGTCAGCCCAAAAGATGTCTTGAGGCCTCATCTGTCGGTCCGAGAAGGGATAGAAATTGTGATATCTGGTGGCATGTCAATACCTCAAATATTGACTACGATGGGTGCTAAGGCTAATCACGCAAGAATGGGTGGCTTCGCGACATCAAAAGTATGA 2310 0.4662 MAIFLPHSAIFAFLAFFHAFSLAYSQSFIGVNYGQVADNLPPPSATAKLLQSTSIEKVRLYGSDPAIIKALANTGIGIVIGAANGDIPALASDPNFARNWINSNVIPFYPASKIILITVGNEVMTSNDQNLINQLLPAMQNLQNAFNSASLGEKIKVSTVHSMAVLRESEPPSSGRFHPSMMKVLKGLLGFNNASGSPFAINPYPYFAYKSDPNRPENLAFCLFQPNSGRFDSNTKIKYMNMFDAQVDAVRSALDSMGFMNVEIVVAETGWPYKGDSDEAGPSFENAKAYNGNLIAHLRSKVGTPLMPGKSVDTYLFALYDEDLKPGPSSERAFGLFKPDLTMTYDVGLTKQNGQKAPDMPKPPVTPMPTPVTPSPTTPKKDVWCVPKAGVSDAQLQANLDYACGHGIDCTPIQPGGACFEPNTVTAHAAYAMNLYYQAAGRYPWNCDFSQTAILSSSNPKIKVQCVAKPNHGTDFGKKLDTRVESENKKENRKWEKGRSYMATRERERDLELLIPVSGISDINVGGSKSSSTSSSPPAIISTHHHSGQEAFSKVIRSWASKKFMSGCVILLPMAITFYITWFFIRFVDGFFSPIYNHLGINIFGLGFLTSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQNSNAFKEVAIIRHPRVGEYALGFITSSVILQRNSDEEELCCVYVPTNHLYLGDIFLVSPKDVLRPHLSVREGIEIVISGGMSIPQILTTMGAKANHARMGGFATSKV 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2685 769 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Dere05g2685 769 Gene3D - 378 476 - -
Dere05g2685 769 FunFam glucan endo-1,3-beta-glucosidase 7 379 468 - -
Dere05g2685 769 Gene3D Glycosidases 28 357 - -
Dere05g2685 769 MobiDBLite consensus disorder prediction 351 379 - -
Dere05g2685 769 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 454 IPR044965 GO:0004553|GO:0005975
Dere05g2685 769 MobiDBLite consensus disorder prediction 360 376 - -
Dere05g2685 769 FunFam Glucan endo-1,3-beta-glucosidase 14 27 355 - -
Dere05g2685 769 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Dere05g2685 769 MobiDBLite consensus disorder prediction 526 545 - -
Dere05g2685 769 SMART X8_cls 383 468 IPR012946 -
Dere05g2685 769 Pfam Protein of unknown function (DUF502) 610 710 IPR007462 -
Dere05g2685 769 Pfam X8 domain 384 453 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2685 Dere-ChrDere05 37643383 37648118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2685 25 505 Miscellaneous Gene Families AT2G16230 62.656 0.0 602