Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2681 ATGGACAAAAACAAATTAACTATCCTTAATAATGTGGATAAGGTGTGCAATGCAAACGGTGTAGGTCGTACGTGCAGGATTGGTCCCAGTCAAAATAAGAAAGACGTGTGCTTTGAGGCAAATGCCAGGGTTGATTTTCCTTCTTGTTTGGAAATACTTGTCTATAATGTCCACGTGCGATCCGTTCGACCAATTGGGTTGCCAGGGGAGATATGCTTGGTTGAACTCGTCAACGCATTTCGGGCCGGCCTTTATTTTCTTATAAATATATTCGTCACCCTTGAGGAGCAAATTGTAGCATTTTTGTTTCAGGGTAATTCAAATTTACACAAGCTTTCCAGCATGGCAAAACGCTTCAAACTGAAGCTCGCAATCCCTTCCTTTCAATTGTGTCGCTCAAAAAGGCTTTCTGATTTCCCAGGAAATCCAGTTCCCGCCATATATCGTCTTTCTCCTGTGAACCCCAAAGCACTTGATATCGCGTTCCCTCACGTGCCGGATCCCCCACCCTCCACTCCTGAAAACCGTCACCGATCAAGGCCCGTTTACTGTGAATCCAACTTCTGCAAAATGGGCGGTGACAAGGGCACGAAAGTGAAATCCAGAGGCCGAGGGAGTACGACGACAAGCGTTTCGTCCAAGAGAAGTAACTTCCTCGTGGACAGAGATGAAGAGAACGAGAGTCTGATTTCCTGCTTGACCAACTTCTCCGAGGAGTTCTATCACGAGGCTGTTCGTGAGAGAGAAATTAGCAGGCATGTAATTAGCAGCGCAAAGAAGGTTCAGAGTCAAAGGTTTCAAGGATCGGAGAGGATAAAGAAGACGACGTCGTCGGCTGGATCAATGACGAGGCGCACGGTGGAGGGGAAGGTGAAGGAGAGCTTCGCGGTGGTGAAGAGGTCGAAGGATCCGTACAAGGACTTCAAGAAATCGATGCTGGAGATGATAATGGAGATGGAGATGTTTGAGGCCAAGGAATTGGAGCAACTTCTACAGTGTTTTCTGACGCTCAACTCACGCCAGTATCATGGAGTAATAGCACGAGCTTTCATGGAAATCTGGCAAGAATTGTTCACTGAAACTCGCGTTGATGACAGGAAATATCCTAAGCACAGGCTTTGA 1122 0.4679 MDKNKLTILNNVDKVCNANGVGRTCRIGPSQNKKDVCFEANARVDFPSCLEILVYNVHVRSVRPIGLPGEICLVELVNAFRAGLYFLINIFVTLEEQIVAFLFQGNSNLHKLSSMAKRFKLKLAIPSFQLCRSKRLSDFPGNPVPAIYRLSPVNPKALDIAFPHVPDPPPSTPENRHRSRPVYCESNFCKMGGDKGTKVKSRGRGSTTTSVSSKRSNFLVDRDEENESLISCLTNFSEEFYHEAVREREISRHVISSAKKVQSQRFQGSERIKKTTSSAGSMTRRTVEGKVKESFAVVKRSKDPYKDFKKSMLEMIMEMEMFEAKELEQLLQCFLTLNSRQYHGVIARAFMEIWQELFTETRVDDRKYPKHRL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2681 373 ProSiteProfiles OVATE domain profile. 297 356 IPR006458 -
Dere05g2681 373 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 212 359 IPR038933 GO:0045892
Dere05g2681 373 NCBIfam uncharacterized plant-specific domain TIGR01568 295 358 IPR006458 -
Dere05g2681 373 MobiDBLite consensus disorder prediction 194 213 - -
Dere05g2681 373 Pfam Transcriptional repressor, ovate 301 358 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2681 Dere-ChrDere05 37597960 37599886 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere05g2681 Ovate 1.8e-23 No_clan