Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2673 ATGGTGTCACTTCATTTGAAGGGCAAATCAGCCGCCCGTTTTTCTCTGTTTCCCAAAGTTAATTCAACTAGCTATGGTCCTGGCAAAACCCCAGTTTATCTGAATGTATATGACTTGACACCCATGAATGGTTATATGTACTGGGCTGGCCTAGGTATCTATCACTCTGGTGTGGAAGTGTATGGTGTGGAATATGCATTTGGAGCTCATGACTATCCAACTAGCGGTGTATTTGAGGTGGAACCTCGGCAATGCCCTGGATTCAAGTTCAGGAAATCAATATTCATAGGAACCACATGTTTGGATCCTGTTCAGGTTAGGGAGTTCATGGAACGCCAGTCAACAAGCTACAATGGCGACACATATCACTTGATTGTTAAGAATTGCAACCATTTCTGCAAGGACATCTGTTACAAGCTGACAGGGAAGTCAATTCCAACATGGGTAAATCGACTGGCCAGACTAGGTTCAGTTTGTAACTGCATTCTTCCTGAAGCACTCAGAATTTCTGCTGTGAGGCATGATCCTAATTACCAGCCCCATGATAGTGAAAAAAGAAGGCTGAGAAGTGCCTTCAATTGCCTGTCCTCAATCTCAATGCGGCAAAAGCACTTATCAACGTCTTCACTGTTCCTACAGTCACCCTTGAGAGGCTGCTTATCATCATGGGAATTGCGGAAGTCCATTAAAGAAAGGTGA 699 0.4406 MVSLHLKGKSAARFSLFPKVNSTSYGPGKTPVYLNVYDLTPMNGYMYWAGLGIYHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTCLDPVQVREFMERQSTSYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSVCNCILPEALRISAVRHDPNYQPHDSEKRRLRSAFNCLSSISMRQKHLSTSSLFLQSPLRGCLSSWELRKSIKER 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2673 232 Gene3D PPPDE domains 26 177 IPR042266 -
Dere05g2673 232 ProSiteProfiles PPPDE domain profile. 30 167 IPR008580 GO:0008233
Dere05g2673 232 Pfam PPPDE putative peptidase domain 31 166 IPR008580 GO:0008233
Dere05g2673 232 SMART DUF862_2a 30 168 IPR008580 GO:0008233
Dere05g2673 232 PANTHER DESUMOYLATING ISOPEPTIDASE 28 209 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2673 Dere-ChrDere05 37528476 37530496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2673 05 37528476 37530496 Dere05g2673 05 37528476 37530496 ECH