Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2653 ATGGCACTTTCCATATCTTCCCTTTCTGCTTCCCTCTCATGTCTCTCGTTCTCCTCTCATGTTTCCTACAAACCTAGAACCCTCTTATTTGGCAGAATCGAATCCATCTCAATCTCCCCCCTGTCCAGAACGCCCTCGCTGGTTGCATCCGCCGCCGTCGCCGCCGCCGCCGCATCTCCGGCTGAATTGGAAACAGCTGACCTCAAGAAATATGTGAAATTGAGACTTCCCGGCGGTTTTGCTGCTCAAACAATTATAGGCACCGGTCGTCGAAAAAGCGCCATTGCTCGGGTTGTTCTCCAGGAAGGAACTGGCAAATTCATTATCAATTACCGTGACGCTAAGGAATATCTTCAGGGAAATCCATTGTGGCTTCAATACATTAAGGTCCCATTAATAACGTTGGGATATGAAAATAGTTATGATGTTTTTGTCAAAGCTCAGGGCGGCGGCCTCTCTGGCCAGGCTCAAGCAATCTCTCTGGGGATTGCTCGAGCCTTGCTGAAGGTGAGTGAAGACCACAGGACGCCTCTGAGACAGGAAGGGCTCTTGACTAGAGATTCAAGAGTCGTTGAGAGGAAGAAAGTTGGTCTGAAGAAAGCCCGTAAAGCCCCTCAGTATTCAAAACGCATATTTCTAGATACGGTATTAGAGCGTGGATGGAGGCTCCCAGAAGAGTAA 681 0.489 MALSISSLSASLSCLSFSSHVSYKPRTLLFGRIESISISPLSRTPSLVASAAVAAAAASPAELETADLKKYVKLRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITLGYENSYDVFVKAQGGGLSGQAQAISLGIARALLKVSEDHRTPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKRIFLDTVLERGWRLPEE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2653 226 SUPERFAMILY Ribosomal protein S5 domain 2-like 84 210 IPR020568 -
Dere05g2653 226 PANTHER RIBOSOMAL PROTEIN S9 56 210 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dere05g2653 226 Hamap 30S ribosomal protein S9 [rpsI]. 80 210 IPR023035 -
Dere05g2653 226 ProSitePatterns Ribosomal protein S9 signature. 149 167 IPR020574 GO:0003735|GO:0005840|GO:0006412
Dere05g2653 226 Pfam Ribosomal protein S9/S16 89 210 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dere05g2653 226 Gene3D - 76 210 IPR014721 -
Dere05g2653 226 FunFam 30S ribosomal protein S9 80 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2653 Dere-ChrDere05 37360597 37362457 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2653 05 37360597 37362457 Dere05g2653 05 37360597 37362457 ECH