Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2642 ATGCCAGTTACACTCCGGAATTTGGGTTGTGACAATGTTTTGGGTGGCCATGTGAAGGACATGAAAAATGTGGCCAAAGAAATGGATACCATTATCCGTGAATGGTTAGAGGAACATTGTCAAAAGAGAGACTTAGGTGTGCATAAAACAGAGCAAGACTTCATCAATGCCATGTTGTCTGTCCTTGAAAAGGTTGACCTTGCTGGCTATGATGTTAATACTATCATTAAAGCCACTTGCTCACGTATCAGACAACAGCTCAAAGTCGCCATGTATGAGACGCTTCAGATGTATCCGAGTGCTGCTGTTGCCGGACTCATCGCCATAGCATTCATTTATTACTATTTCCTGAGGAGGGATCCTCGAAAACCACCGGAAGCTGCGGGCGGGTGGCCTCTGATCGGTCATCTTCCCATCTTAGGTGCTTCTGGGAAGCCTCCTCACATAACCTTGGGAGCCTTGGCCGACAAGTATGGACCAATTTTTAGCATCCGGATCGGGGTCCACCCAGCCGCGGTGGTGAGCAGTTGGGAGCTGGCCAAGGAATGTTTCACTACCCATGATGCCAAAATCTCTTCTCGTCCCAAGTTTACAGCTGCGAAGATCCTGGGATACGACTATGCTAATTTTGGATTCACCCCATACGGTGCTTACTGGCGTGAAATACGCAAGATTACGACTTCTGAGTTACTTTCAGCTCGCCGCTTTGAAATGCTTCAATATATCAGAGACTCTGAGGTCCAGAGCTCGTTGAAAGAGATATACAGAGCATGGACCAACAGAAGAGACGGCTCCGGGGCTGTGTCGGTGGAGATGAAGCGATGGTTGGGAGACACAAATCTCAACGTGATTCTGAGAATGGTTGCAGGAAAGAGATACTCGGGCCAAGATAAAGATGAGATAGAGGTGAGGCGATGCCGAAAGGTGTTTAGGGAGTTCTTTCGCTTGTTAGGACTTTTTGTGGTTGGAGACGCAATTCCATTTCTTGGGTGGCTTGATTTGGGTGGCCACGTGAAAGAGATGAGAGAAACAGCCAAAGAAATGGATAATGTTATCCGTGAATGGTTAGAGGAACATCGTCAAAAGAGAGACTCTGGTGTGCATAAAACAGAGCAGGACTTCATCGATGTCTTGTTGTCTGTCCTTGACAAGGCTGACCTAGCTGGCTATGATGCTGATATTGTCAACAAAGCCACCTGCTCGATGATAATTGCAGGGGCAACAGATTCCACAGCAGTTACCATGACATGGGGATTGTCCTTATTGCTGAATAATCGCGATGCTTTGAAGAAAGTCCAAGATGAGTTAGACGCGGAGGTGGGCAAAGATAGACTAGTGAGTGAATCAGATATAAGCAGATTAGTGTATCTTCAAGCCGCAGTTAAAGAGACATTGAGATTATACCCGGCAGGAACGCTCTCGGGTCCGCGTGAATTCACACAAGACTGCGCCTTATGGGGATACCATATACCTGCGGGTACTCGATTGATTTTGAACCTTTGGAAACTACAGAGAGACCCACGCGTATGGTCAGAGCCATTAGAGTTCAAACCAGAAAGGTTCTTGACCACCCACAAGGACATTGACGTGAACGGTCAACATTTTGAGTTGATTCCCTTCGGAGGAGGAAGAAGGGTATGTCCTGGAGTATCATTCGGCCTACAAATGACACACTTGGCTCTCGCTGGTCTGTTGCACGCATTTGATGTCACGACCCCTTCGAATGCCCCAGTTGATATGTCTGCCACATTCGGACTCACTAACATGAAGAGCACCCCTCTTGAGGTTTTACTCAAGCCTCGCTTATCACCTTCTCTTTATCAAGATTTGGATTTAAGAGTTGAAATTCGTGAAGGGGAAAATGCTAAACAAAATTACTTAGCCATCTCATTGGAGGCTACTAGAGAATCTCAAGCAGGGGAAGGTGGAATCATGGAAGGGGAAATTATCATGGTAGGGTTTGAATTTGATTCATGTTCTTTGATTCTTGCTTGA 1995 0.4642 MPVTLRNLGCDNVLGGHVKDMKNVAKEMDTIIREWLEEHCQKRDLGVHKTEQDFINAMLSVLEKVDLAGYDVNTIIKATCSRIRQQLKVAMYETLQMYPSAAVAGLIAIAFIYYYFLRRDPRKPPEAAGGWPLIGHLPILGASGKPPHITLGALADKYGPIFSIRIGVHPAAVVSSWELAKECFTTHDAKISSRPKFTAAKILGYDYANFGFTPYGAYWREIRKITTSELLSARRFEMLQYIRDSEVQSSLKEIYRAWTNRRDGSGAVSVEMKRWLGDTNLNVILRMVAGKRYSGQDKDEIEVRRCRKVFREFFRLLGLFVVGDAIPFLGWLDLGGHVKEMRETAKEMDNVIREWLEEHRQKRDSGVHKTEQDFIDVLLSVLDKADLAGYDADIVNKATCSMIIAGATDSTAVTMTWGLSLLLNNRDALKKVQDELDAEVGKDRLVSESDISRLVYLQAAVKETLRLYPAGTLSGPREFTQDCALWGYHIPAGTRLILNLWKLQRDPRVWSEPLEFKPERFLTTHKDIDVNGQHFELIPFGGGRRVCPGVSFGLQMTHLALAGLLHAFDVTTPSNAPVDMSATFGLTNMKSTPLEVLLKPRLSPSLYQDLDLRVEIREGENAKQNYLAISLEATRESQAGEGGIMEGEIIMVGFEFDSCSLILA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2642 664 Coils Coil 338 358 - -
Dere05g2642 664 Pfam Cytochrome P450 129 586 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 CDD CYP82 159 601 - -
Dere05g2642 664 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 540 549 IPR017972 GO:0005506|GO:0016705
Dere05g2642 664 Gene3D Cytochrome P450 117 602 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS P450 superfamily signature 406 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS P450 superfamily signature 538 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 SUPERFAMILY Cytochrome P450 130 601 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 499 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 415 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 458 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 537 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 179 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 547 570 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 155 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 PRINTS E-class P450 group I signature 279 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g2642 664 FunFam Cytochrome P450 82C4 117 599 - -
Dere05g2642 664 PANTHER CYTOCHROME P450 82C3-RELATED 107 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2642 Dere-ChrDere05 37220698 37227582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2642 14 80 Cytochrome P450 AT4G31940 42.857 1.89e-10 62.0