Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2629 ATGCAAGCGATAGGCTGCATCCTAATTCTATCATTCTTTCTCTTATCAACAACCTTTTCAAATGCTCTTTCTAATGCCCAAGCCTCCTTCATTGCTCGTCGACAATTGTTACATCTTCGTGAGAATGGAGATTTACCTGATAATTATGCAGATAACTATAAAACAAATCTAAAGTTTCCCAATCCTAGACTCAAGCATGCTTATATTGCCCTTCAAGCATGGAAGATGGCAATATATTCAGACCCATTTGAAACCACAAAAAACTGGGTGGGGCCAGATGTTTGTTCATACAATGGGGTTTTCTGTGCCCAGGCTCCAGACGACCCAAAACTCACTGTTGTGGCTGGAATTGATCTTAACCATGCAGACATTGCAGGTTATCTTCCTGCAGAGATCGGTTTGTTGACTGACCTTGCTTTGCTTCATATAAATTCAAACAGGTTCTGTGGGATTCTTCCAAAAAGCTTCTCTAAGCTAACGCTTTTATATGAGCTTGATGTTAGCAATAATCGCTTTGTTGGCCCATTCCCAGATTGCATTCTTCCAATTCCGGATATTAAATACATTGACCTCAGGTTCAATAACTTTGAGGGCCCATTGCCTTCGGAGCTTTTCAACAAGCCTGTTGATGCTATATTTTTAAACAACAATCGTTTCACATCCACAATTCCTGAAAACTTGGGCAACTCTCCAGCCTCTGTAATTGTGTTTGCTCATAACCATTTCAAGGGCTGCATTCCAGAGAGCATTGGTGGAATGGAAAACACGTTGAATGAGATCGTTTTTACCAATAACAAAATCACTGGGTGCTTACCTGTAGAAATTGGAAAGCTAAGTAATGTCACAGTCTTCGATATAAGCGAGAACATGTTTGGTGGCATATTACCCAAATCGTTTAGTGGACTCCAAAAGGTAGAGCACTTATCTATTGCCCATAACAAACTCACTGGCTTTGTCCCACAAAGCATATGTAGCTTGCCCAGCTTGGAGAATTTCTCGTTCCCTGATAACTATTTTAATGGTGAGGAACAAGGTTGTACGCCTTCTTTTAGAAAGAACGTTGTGTTCGATGATAATAGCAATTGCATACCAAACAGGCCAAATCAAAAGGCAGCAAATGTATGCAGTGCTGTGGTTAGCAAGCCAGTTGATTGTAGCAAAGCACAGTGCGGCCATACATCAGTTCCAAAACCACAATCACCTAAAGAAGAACAACCTCAACCACCCAAAGAGGAACATCCTACAACTCAGCCACCTCCACAAAGGCCTTCGAAACCTCAAACACCCAAGGAACAACCACCAAAGGTGGAAGTTCCAAAACAACAACCACAATCACCTAAGGGAGAGCCACCAAAAGAGCAAGTTCTAAGACCACAACCTCAACCACCTAAGGAAGAACCACCAAAAGAGAATTATCCTAAACCCCAATCACCCAAGCCACAACCTCAACCTCCAAAGGAAGAACCTAAACCTCAACCTCCAAAAGTGGAAGCACCTAAACCTCAGCCTCCCAAGGAAAAACAGCCAAATGAGGAAGTACCTAAACCTCCATCTCCCAAACCACAACCACAACCTCCTAAGGAAGAACCTCCAAAAATGGAAGTACCTAGACCTCAACCTCCCAAACCTAAATCCCAACCAACAAAGGAAGAAACACCAAAGGAAGAAGCTCCCAAACCTCAATCGCCAAAAGCACAGCCTCAACCACCTAAGCAAGAACCCCCTAAAGTGGAAGCTCCTAAACCTCAACCCCAAACACCAACAACTCGTCCACCCCAAGATGATCCTCATAAAGAAACACCTAAACATCGACGCCGAGGAAGCTCTCCACCACTTCCAGTTCATTCTTCACCACCCCAAATCCATTCTCCGCCACCTCCACCAATACACTCTCCACCCCCACCTGTCCATTCTCCACCACCTCCGCCAGTACACTCTCCACCCCCACTAGTCCACTCTCCACCACCCCTAGTACACTCTCCACCACCCATTGTCCATTCTCCACCACCTTTACTAGTTCAATCCCCTCCCCCACTAGTCCATTCTCCTCCACCCCCTATCAATTCCCCATCACCTCCAGTTCACTCTCCGCCACCTCCAATTCACTCTCCACCACCCCCAATCCATTCTCCACCTCCTCCAATTCACTCTCCTCCACCCCCTATTCAATCTCCACCACCACCAGTTTACTCGCCGCCACCTTCTGTCCATTCTCCCCCACCTCCAGTTTATTCCCCGCCACCTCTTGTCCATTCTCCTCCTCCATCCCCAGTATTCTCTTCACCTCCAATAGTAAACTCATTGCCACCTCCACCTCCAGTCCACTCTTCTCCTACCCCTATTCAATATTCACCTCCACCTTTATCATATCCGTCACCTCCTCCTCCAGAAGACGATATCATTCTTCCACCCATTTTTGGCGCATCATACGCATCACCTCCTCCACCAATCATTCCTGGCTATTAA 2466 0.4558 MQAIGCILILSFFLLSTTFSNALSNAQASFIARRQLLHLRENGDLPDNYADNYKTNLKFPNPRLKHAYIALQAWKMAIYSDPFETTKNWVGPDVCSYNGVFCAQAPDDPKLTVVAGIDLNHADIAGYLPAEIGLLTDLALLHINSNRFCGILPKSFSKLTLLYELDVSNNRFVGPFPDCILPIPDIKYIDLRFNNFEGPLPSELFNKPVDAIFLNNNRFTSTIPENLGNSPASVIVFAHNHFKGCIPESIGGMENTLNEIVFTNNKITGCLPVEIGKLSNVTVFDISENMFGGILPKSFSGLQKVEHLSIAHNKLTGFVPQSICSLPSLENFSFPDNYFNGEEQGCTPSFRKNVVFDDNSNCIPNRPNQKAANVCSAVVSKPVDCSKAQCGHTSVPKPQSPKEEQPQPPKEEHPTTQPPPQRPSKPQTPKEQPPKVEVPKQQPQSPKGEPPKEQVLRPQPQPPKEEPPKENYPKPQSPKPQPQPPKEEPKPQPPKVEAPKPQPPKEKQPNEEVPKPPSPKPQPQPPKEEPPKMEVPRPQPPKPKSQPTKEETPKEEAPKPQSPKAQPQPPKQEPPKVEAPKPQPQTPTTRPPQDDPHKETPKHRRRGSSPPLPVHSSPPQIHSPPPPPIHSPPPPVHSPPPPPVHSPPPLVHSPPPLVHSPPPIVHSPPPLLVQSPPPLVHSPPPPINSPSPPVHSPPPPIHSPPPPIHSPPPPIHSPPPPIQSPPPPVYSPPPSVHSPPPPVYSPPPLVHSPPPSPVFSSPPIVNSLPPPPPVHSSPTPIQYSPPPLSYPSPPPPEDDIILPPIFGASYASPPPPIIPGY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2629 821 MobiDBLite consensus disorder prediction 592 606 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 514 529 - -
Dere05g2629 821 FunFam Leucine-rich repeat extensin-like protein 1 68 229 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 560 591 - -
Dere05g2629 821 Pfam Leucine rich repeat 280 332 IPR001611 GO:0005515
Dere05g2629 821 MobiDBLite consensus disorder prediction 387 821 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 612 801 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 490 513 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 473 489 - -
Dere05g2629 821 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 516 - -
Dere05g2629 821 PRINTS Proline rich extensin signature 402 423 - -
Dere05g2629 821 PRINTS Proline rich extensin signature 473 498 - -
Dere05g2629 821 PRINTS Proline rich extensin signature 427 443 - -
Dere05g2629 821 PRINTS Proline rich extensin signature 450 467 - -
Dere05g2629 821 SUPERFAMILY L domain-like 77 352 - -
Dere05g2629 821 MobiDBLite consensus disorder prediction 411 433 - -
Dere05g2629 821 Gene3D Ribonuclease Inhibitor 235 366 IPR032675 -
Dere05g2629 821 Gene3D Ribonuclease Inhibitor 68 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2629 Dere-ChrDere05 37118933 37121398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2629 4 549 Trihelix Transcription Factor Family AT3G19020 53.135 0.0 586