Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2622 ATGCCTTTTTCTCGCAGATCATCCTCTTCTCCCTCTCCTCTCCCCTCTACGCCTTCCTCTTTTTCGCTTTCGGCTGTCAAACAAACTGACGGCGATGCCAATGGCAATGTCGGTAATTTGGTTGACAGTAAGGCGAAGTCATTTCAGAACCGCCGCCTCACTCGAGCGAGGAAGCTCCGCCACCTTAGCGACCATGATGTTGGCTTGCAACCAACTAGCGATTCTTCGCTTCCGGCTTCGCCACAGTACTCTCTCAAGTCTCGTTCGTCGGGTGCTTCCGAATACAGGTCCTCCTCTGCTGTGCCGCAACCCCTGCCGCTTCCCGAATCACCGTTGACTCGCCAGTCAACCGGTCTTAATCCCGGACATGTCCATCTCGGATCTCCTTCTCTAGAACATTCGGGCTTTGCTTTCGGGAGTGTTGATTTGCTCGAGTACCCTATTCTTTTGCTTCTCAAAATCATCAGGAAGACAATGGATTACGATGCAATGACAAATATAAAGTCTTTGGGCAATTTGGGTAGATCCTCTTGTGATCCAGCCATTGAAGATGCAAAATATAATTTGAGAATAAATATACCAGTTGCGAGTTTTTTTACAGGCCACAGTTCATGCAAAGATCCTAGAGTACTGTCTCATGATACTGACTCTGAAAGTATTTACAACTCGAGATTGCGTGTTGCTGCCAAGAGTGCCCCAACAACTGTTCATTCCAGTCCTGTCACTAGTCCACGTAGATCAAGCAATGTAGATTTCTTTGATCATTTCATTAGTATTCCTCAAGAATTTCATGACAACCCTATTGGTCCAGATCATTCTTCTCTCCATAGCCCAGGGAGCCATAATCCTTACCTCAATATTAAAATTCAAGGTGGACATCAGCCCCATAAATTTTTTTCCAGTGTGTGGCCAGAAAATAACCATGTTGATGCGCATCCATTGCCTCTTCCTCCTGGAGCTTCATCACCAGCACAATCAGCTGTGCAGCGTCAGTCAAGTGCCATGCATCACTCTTCTGAAAATTCTTTTTCCATGAAAGGTCAATGGCAGAAAGGAAGACTTATTGGACGTGGCACATTTGGAAGTGTTTACCATGCAACCAACCTAGAGACTGGAGCTTCATGTGCAATGAAGGAGGTGGATCTCATTCCTGATGACCCTAACTCTGCCAAGAGTATAAAGCAACTAGAGCAGGAAATTAAAATTCTCCGACAACTACATCATCCAAATATTGTGCAATACTATGGCAGTGAAATAGTTGGTGATCACTTGTACATATATATGGAATATGTTCATCCTGGATCAGTTGATAAATTTGTGCGTGCAAATTGTGAAGCGATGACAGAATCTGTTATTCGTAATTTTACACGGCATATTCTCTCAGGGTTGGCTTACTTGCATAGTACCAAAACTATCCACAGGGACATCAAAGGTGCAAACTTACTCGTTGATGCATCGGGCACTGTTAAGCTTGCTGATTTTGGGATGGCAAAAATTCTAACAGGGAAATCATATGAACTTTCTTTGAAGGGCAGTCCGTACTGGATGGCTCCAGAGGTCATGAAGGCTGCCATGATGAAGGATGACAATCCTGACCTTGCCTTTGCTGTTGATATCTGGGGCTTAGGGTGCACCATCATAGAAATGCTAACAGGAAAACCTCCCTGGAGTGATTTCACGGGGCCTCAAGCCATGTTCAAGGTACTGCACAGTTCGCCACCTATACCAGAAACATTATCTCCAGTCGGAAGGGATTTTCTTCAAAGATGTTTTGAAAGGGATCCTGCAAAGCGACCATCAGCGGCAAGGCTTCTTGAGCACGCTTTTGTGCAAAATTTGCATGATCAAGAAATTTTCGTTCGCCCACAATTGTATCCTAGAGAAGATCCTGAAGATAATTCACGTAGTCCCGGAGACTCTGCTATACATAACCGTGATGTCATTCCAGCCCCCATGGGTGCACGGTTCTTCAACAATATCCAGAAATTAATGGGTGATACTTCCAAACAATATAACGCTGCGGGTTCTAACTATATTACATCTTCTCACCGCTCTCCTTACTCTTTGCCAGAAGTTAACATTCGTCAATCTTCCTTTAAACCTACGGCCCTCATGTCTTCTGAAGCTGCTGTACCGTCACTGGCGGCCTCTTTGCCGGGATTCAGGAGCTGCTCATTCACAGTGTCACAGATATATAAATGTCCTGATTGA 2211 0.4491 MPFSRRSSSSPSPLPSTPSSFSLSAVKQTDGDANGNVGNLVDSKAKSFQNRRLTRARKLRHLSDHDVGLQPTSDSSLPASPQYSLKSRSSGASEYRSSSAVPQPLPLPESPLTRQSTGLNPGHVHLGSPSLEHSGFAFGSVDLLEYPILLLLKIIRKTMDYDAMTNIKSLGNLGRSSCDPAIEDAKYNLRINIPVASFFTGHSSCKDPRVLSHDTDSESIYNSRLRVAAKSAPTTVHSSPVTSPRRSSNVDFFDHFISIPQEFHDNPIGPDHSSLHSPGSHNPYLNIKIQGGHQPHKFFSSVWPENNHVDAHPLPLPPGASSPAQSAVQRQSSAMHHSSENSFSMKGQWQKGRLIGRGTFGSVYHATNLETGASCAMKEVDLIPDDPNSAKSIKQLEQEIKILRQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSVDKFVRANCEAMTESVIRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKILTGKSYELSLKGSPYWMAPEVMKAAMMKDDNPDLAFAVDIWGLGCTIIEMLTGKPPWSDFTGPQAMFKVLHSSPPIPETLSPVGRDFLQRCFERDPAKRPSAARLLEHAFVQNLHDQEIFVRPQLYPREDPEDNSRSPGDSAIHNRDVIPAPMGARFFNNIQKLMGDTSKQYNAAGSNYITSSHRSPYSLPEVNIRQSSFKPTALMSSEAAVPSLAASLPGFRSCSFTVSQIYKCPD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2622 736 MobiDBLite consensus disorder prediction 68 100 - -
Dere05g2622 736 MobiDBLite consensus disorder prediction 59 126 - -
Dere05g2622 736 SUPERFAMILY Protein kinase-like (PK-like) 347 689 IPR011009 -
Dere05g2622 736 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 617 - -
Dere05g2622 736 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Dere05g2622 736 MobiDBLite consensus disorder prediction 626 645 - -
Dere05g2622 736 Pfam Protein kinase domain 350 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2622 736 SMART serkin_6 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2622 736 MobiDBLite consensus disorder prediction 322 347 - -
Dere05g2622 736 MobiDBLite consensus disorder prediction 1 44 - -
Dere05g2622 736 Gene3D Transferase(Phosphotransferase) domain 1 339 646 - -
Dere05g2622 736 ProSiteProfiles Protein kinase domain profile. 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2622 736 FunFam Mitogen-activated protein kinase kinase kinase 5 346 646 - -
Dere05g2622 736 MobiDBLite consensus disorder prediction 309 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2622 Dere-ChrDere05 37056757 37062260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2622 225 612 MAP Kinase Kinase Kinase AT5G66850 55.324 1.24e-151 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere05g2622 Pkinase 1.2e-66 CL0016