Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2589 ATGGATAAGAAGTGTGCTCTGTGTGGGGTTCTTAGAATTCTTGGAATGGGTAGGTGTTGGTTGGTTGGGATATTGATTGTGGTGGCCAATGCGTGGTATTTGGTCCTAGGGTACCCCTCCGAGGATCTGGTGGTGAGTTTGCCTGGCCAACCCAAGGTCGGGTTTAAGCAGTATGCTGGATATGTTGATGTAGATGTTAGCCATGGAAGGAGCTTGTTCTACTACTTTGTGGAGGCAGATAAGGACCCTGACCAGAAGCCCCTTACCCTCTGGCTCAACGGAGGTCCGGGATGCTCCTCCATTGGGGGAGGTGCCTTTACTGAATTGGGTCCCTTTTATCCTCAAGGAGATGGCCATGGTCTCCGAGGAAATTCAATGTCTTGGAATAGAGCATCCAACCTCTTGTTTGTGGAATCTCCCGCCGGAGTTGGATGGTCATACTCAAATACAACTTCAGATTATAACTGCGGAGATGCCTCCTCGGCCAATGATATGTATTTATTCTTGCTGAAATGGTACGAGAAATTTCCTACATTTAGAACAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCCGATGTTCTACTAAACCACAATAATGCTTCAAGTGACTTCAAATTCAACATTAAAGGAGTTGCCATTGGAAACCCACTTCTGAGACTTGATCGGGACATTCCGGCAACATATGAATTCTTCTGGTCCCATGGAATGATTTCTGATGAAATTGGCCTTACCATTATGAACGACTGCGATTTTGATGATTATGTCTTTGCAAGTCCTCACAATGTGTCCCATTCTTGCAACCATGCCATATCTGAAGCAAATCGCATCGTTGGTGAGTATATAAACAATTATGATGTGATTCTGGATGTTTGTTATCCATCCATACTGGAGCAAGAACTGAGATTGAAGAAGATGGCTACTAAAATAAGTTTGGGTGTAGATGTCTGTATGACTTTTGAAAGGCGTTTTTATTTTAATCTCCCTGAGGTTCAGAAGGCTTTACATGCAAATCGCACCAATCTACCTTATCCCTGGTCTATGTGTAGTGGTATTTTAAACTATAGCAATACTGATGGGAACATCAATATCCTCCCAATTCTCTCAAGGATCATTCAAAATCAAATCCCAGTTTGGATATTCAGTGGAGACCAAGATTCTGTTGTGCCATTAATGGGTTCTAGAACACTGGTTCGTGAACTAGCCAATGACCTGAAGTTCAACATCACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGCAACCGTATATGGGAATTTGTTGACTTTTGCCACAGTGAGAGGGGCTGCTCACATGGTACCATATGCACAACCATCAAGATCACTCCATCTATTCACTTCATTTGTTCGTGGCCGGAGATTGCCGAACACAACTCGTCCTTCCATTGATGAATAA 1455 0.4392 MDKKCALCGVLRILGMGRCWLVGILIVVANAWYLVLGYPSEDLVVSLPGQPKVGFKQYAGYVDVDVSHGRSLFYYFVEADKDPDQKPLTLWLNGGPGCSSIGGGAFTELGPFYPQGDGHGLRGNSMSWNRASNLLFVESPAGVGWSYSNTTSDYNCGDASSANDMYLFLLKWYEKFPTFRTRELFLTGESYAGHYIPQLADVLLNHNNASSDFKFNIKGVAIGNPLLRLDRDIPATYEFFWSHGMISDEIGLTIMNDCDFDDYVFASPHNVSHSCNHAISEANRIVGEYINNYDVILDVCYPSILEQELRLKKMATKISLGVDVCMTFERRFYFNLPEVQKALHANRTNLPYPWSMCSGILNYSNTDGNINILPILSRIIQNQIPVWIFSGDQDSVVPLMGSRTLVRELANDLKFNITVPYGAWFHKGQVGGWATVYGNLLTFATVRGAAHMVPYAQPSRSLHLFTSFVRGRRLPNTTRPSIDE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2589 484 Pfam Serine carboxypeptidase 49 471 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 Gene3D alpha/beta hydrolase 39 301 IPR029058 -
Dere05g2589 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 Gene3D - 325 361 - -
Dere05g2589 484 FunFam Carboxypeptidase 372 471 - -
Dere05g2589 484 SUPERFAMILY alpha/beta-Hydrolases 40 474 IPR029058 -
Dere05g2589 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 458 IPR001563 GO:0004185|GO:0006508
Dere05g2589 484 Gene3D - 372 471 - -
Dere05g2589 484 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Dere05g2589 484 FunFam Carboxypeptidase 38 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2589 Dere-ChrDere05 36472843 36476345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2589 331 474 Calmodulin-binding Proteins AT2G22960 25.694 1.61e-10 58.5